RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 MFSD11O43934 449 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 MDH1P40925 334 aaKnown RBP20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 PGFP49763 221 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 TLE2Q04725 743 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 KCNJ11Q14654 390 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 STAT4Q14765 748 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 ANKMY2Q8IV38 441 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 NETO2Q8NC67 525 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 TFB1MQ8WVM0 346 aaKnown RBP20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 FUBP3Q96I24 572 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 PGLYRP2Q96PD5 576 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 CCDC77Q9BR77 488 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 PHACTR1Q9C0D0 580 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 ABCC13Q9NSE7 274 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 SLC12A6Q9UHW9 1150 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 PLXNA3P51805 1871 aa20.53■□□□□ 0.88
PDLIM5-205ENST00000380180 A0A087WUV0 522 aaPredicted RBP20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 E7ESA3 106 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 CHADO15335 359 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 FGFR3P22607 806 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 PBX3P40426 434 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 DDR2Q16832 855 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 TRIM60Q495X7 471 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 SDHAF4Q5VUM1 108 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 BTBD8Q5XKL5 378 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 PDIK1LQ8N165 341 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 LGMNQ99538 433 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 CTNNAL1Q9UBT7 734 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 NR2E3Q9Y5X4 410 aa20.52■□□□□ 0.88
PDLIM5-205ENST00000380180 HACD1B0YJ81 288 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 DCLK1O15075 740 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 GCATO75600 419 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 GALTP07902 379 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 GPR15P49685 360 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 MTM1Q13496 603 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 PAFAH1B3Q15102 231 aaKnown RBP20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 FAXCQ5TGI0 409 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 HEATR6Q6AI08 1181 aaKnown RBP20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 FUT10Q6P4F1 479 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 VSTM1Q6UX27 236 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 LEKR1Q6ZMV7 388 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 SCD5Q86SK9 330 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 STKLD1Q8NE28 680 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 PYROXD1Q8WU10 500 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 RNF34Q969K3 372 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 MRPL9Q9BYD2 267 aaKnown RBP20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 STMN4Q9H169 189 aaPredicted RBP20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 ETNK1Q9HBU6 452 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 PCDHB5Q9Y5E4 795 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 SF3B1O75533 1304 aaKnown RBP eCLIP20.51■□□□□ 0.873e-6■■■■■ 150.5
PDLIM5-205ENST00000380180 C5orf60A6NFR6 353 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 EIF3HO15372 352 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 PARNO95453 639 aaKnown RBP20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 IGLV3-25P01717 112 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 ERCC2P18074 760 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 HCAR3P49019 387 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 TPI1P60174 286 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 ZNF280DQ6N043 979 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 LRRC31Q6UY01 552 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 C4orf22Q6V702 233 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 CAPN12Q6ZSI9 719 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 HTR3CQ8WXA8 447 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 C8orf48Q96LL4 319 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 TOX2Q96NM4 488 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 VPS37BQ9H9H4 285 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 OR12D3Q9UGF7 316 aa20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 ZMYND8Q9ULU4 1186 aaPredicted RBP20.51■□□□□ 0.87
PDLIM5-205ENST00000380180 IVLP07476 585 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 VAV1P15498 845 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 ARPP19P56211 112 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 EIF4EBP2Q13542 120 aaPredicted RBP20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 BBS9Q3SYG4 887 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 TMEM173Q86WV6 379 aaPredicted RBP20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 NUP93Q8N1F7 819 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 ATAD1Q8NBU5 361 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 WDR83Q9BRX9 315 aaKnown RBP20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 KLC2Q9H0B6 622 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 CRISPLD2Q9H0B8 497 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 NMUR1Q9HB89 426 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 SNX10Q9Y5X0 201 aa20.5■□□□□ 0.87
PDLIM5-205ENST00000380180 OR6C75A6NL08 312 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 E7EVH7 732 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 TRIM66O15016 1216 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 METTL18O95568 372 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 GPX6P59796 221 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 CCDC38Q502W7 563 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 TTC9BQ8N6N2 239 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 FBXO36Q8NEA4 188 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 TMEM175Q9BSA9 504 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 SFMBT1Q9UHJ3 866 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 CLUHO75153 1309 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 A0A1W2PQH9 124 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 UPP2O95045 317 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 MMP13P45452 471 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 AP1B1Q10567 949 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 RTP2Q5QGT7 225 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 RSPO2Q6UXX9 243 aaPredicted RBP20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 TAS1R1Q7RTX1 841 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 EXOC3L1Q86VI1 746 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms