RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 M0QZQ0 153 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 NCAM1P13591 858 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 KRT4P19013 534 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 SP3Q02447 781 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 SEMA5AQ13591 1074 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 RFX8Q6ZV50 586 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 METTL23Q86XA0 190 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 NETO2Q8NC67 525 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 PKMYT1Q99640 499 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 RASSF4Q9H2L5 321 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 PLAC1Q9HBJ0 212 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 SSU72Q9NP77 194 aaKnown RBP25.82■■□□□ 1.72
NDEL1-202ENST00000380025 TTLL3Q9Y4R7 772 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 COL4A4P53420 1690 aaPredicted RBP25.82■■□□□ 1.72
NDEL1-202ENST00000380025 EEF2KO00418 725 aaKnown RBP25.82■■□□□ 1.72
NDEL1-202ENST00000380025 C1QAP02745 245 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 AMHP03971 560 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 TAC1P20366 129 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 AIF1P55008 147 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 SCAPQ12770 1279 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 PRKD1Q15139 912 aaPredicted RBP25.82■■□□□ 1.72
NDEL1-202ENST00000380025 ZNF598Q86UK7 904 aaKnown RBP25.82■■□□□ 1.72
NDEL1-202ENST00000380025 ECHDC2Q86YB7 292 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 CCT6BQ92526 530 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 PGAP3Q96FM1 320 aaPredicted RBP25.82■■□□□ 1.72
NDEL1-202ENST00000380025 TMLHEQ9NVH6 421 aa25.82■■□□□ 1.72
NDEL1-202ENST00000380025 A0A0A0MRY4 1105 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 FAM72CH0Y354 149 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 CA4P22748 312 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 PAFAH1B3Q15102 231 aaKnown RBP25.81■■□□□ 1.72
NDEL1-202ENST00000380025 SPRED3Q2MJR0 410 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 ANKRD20A2Q5SQ80 823 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 FAM72AQ5TYM5 149 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 ANKRD20A1Q5TYW2 823 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 ANKRD20A3Q5VUR7 823 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 FAM72DQ6L9T8 149 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 FAM72BQ86X60 149 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 SLC44A1Q8WWI5 657 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 PPM1EQ8WY54 764 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 RSPH1Q8WYR4 309 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 SPATA13Q96N96 652 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 ZC3H7BQ9UGR2 993 aaKnown RBP25.81■■□□□ 1.72
NDEL1-202ENST00000380025 BRCA2P51587 3418 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 FRMPD3Q5JV73 1810 aa25.81■■□□□ 1.72
NDEL1-202ENST00000380025 DCLK1O15075 740 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 AOC2O75106 756 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 ITGB1P05556 798 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 BDNFP23560 247 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 ACLYP53396 1101 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 SEMA3BQ13214 749 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 PRPF39Q86UA1 669 aaKnown RBP25.8■■□□□ 1.72
NDEL1-202ENST00000380025 OR10T2Q8NGX3 314 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 LRRC39Q96DD0 335 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 PAIP2Q9BPZ3 127 aaKnown RBP25.8■■□□□ 1.72
NDEL1-202ENST00000380025 FBXW11Q9UKB1 542 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 GRID1Q9ULK0 1009 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 PTPRDP23468 1912 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 SKIP12755 728 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 SPARCL1Q14515 664 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 SLC1A5Q15758 541 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 ZKSCAN8Q15776 578 aaPredicted RBP25.8■■□□□ 1.72
NDEL1-202ENST00000380025 MAP3K21Q5TCX8 1036 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 DENND5BQ6ZUT9 1274 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 RNF180Q86T96 592 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 UROC1Q96N76 676 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 TMEM209Q96SK2 561 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 DDIT4Q9NX09 232 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 DSEQ9UL01 958 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 NLRC5Q86WI3 1866 aa25.8■■□□□ 1.72
NDEL1-202ENST00000380025 F8W810 466 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 FSBPO95073 299 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 LRRTM3Q86VH5 581 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 EDEM1Q92611 657 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 P2RY11Q96G91 374 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 SIGLEC10Q96LC7 697 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 SQORQ9Y6N5 450 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 CABYRO75952 493 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 YY1P25490 414 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 GLUD2P49448 558 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 AP1B1Q10567 949 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 PM20D1Q6GTS8 502 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 RRN3Q9NYV6 651 aa25.79■■□□□ 1.72
NDEL1-202ENST00000380025 USP15Q9Y4E8 981 aaPredicted RBP25.79■■□□□ 1.72
NDEL1-202ENST00000380025 CCT8L1PA6NM43 557 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 INPPL1O15357 1258 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 GRIA1P42261 906 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 PDK1Q15118 436 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 OVOS1Q6IE37 1185 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 MICALL1Q8N3F8 863 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 IRGQQ8WZA9 623 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 PRDM12Q9H4Q4 367 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 DMAP1Q9NPF5 467 aaPredicted RBP25.78■■□□□ 1.72
NDEL1-202ENST00000380025 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.78■■□□□ 1.72
NDEL1-202ENST00000380025 PATJQ8NI35 1801 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 RNF103O00237 685 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 FDFT1P37268 417 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 NOGQ13253 232 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 LACTB2Q53H82 288 aaPredicted RBP25.78■■□□□ 1.72
NDEL1-202ENST00000380025 CGB2Q6NT52 195 aa25.78■■□□□ 1.72
NDEL1-202ENST00000380025 TP53INP2Q8IXH6 220 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms