RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 SNX10Q9Y5X0 201 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 CDY1Q9Y6F8 540 aa17.96■□□□□ 0.47
THUMPD2-201ENST00000378727 CFAP69A5D8W1 941 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 GOLGA6CA6NDK9 693 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 DCLK1O15075 740 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 GOLGA6DP0CG33 693 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 EIF3BP55884 814 aaKnown RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 GAD2Q05329 585 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 USP41Q3LFD5 358 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 SLC45A4Q5BKX6 768 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 KCTD16Q68DU8 428 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 FAM117BQ6P1L5 589 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 NECAB2Q7Z6G3 386 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 MON1AQ86VX9 555 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 PPIL6Q8IXY8 311 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 UHMK1Q8TAS1 419 aaKnown RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 RBM15Q96T37 977 aaKnown RBP eCLIP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 FBXO44Q9H4M3 255 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 GOLGA6AQ9NYA3 693 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 TCRBV7S3A2A0A539 114 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 FAM92AA1XBS5 289 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 MSI1O43347 362 aaKnown RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 TTC4O95801 387 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 MYZAPP0CAP1 466 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 HAPLN1P10915 354 aaPredicted RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 WDR5P61964 334 aaKnown RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 GABPB1Q06547 395 aaPredicted RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 KYNUQ16719 465 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 MGAT5BQ3V5L5 792 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 PCGF5Q86SE9 256 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 CDKL3Q8IVW4 592 aaPredicted RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 SH2D3CQ8N5H7 860 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 NETO2Q8NC67 525 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 FBXO22Q8NEZ5 403 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 QKIQ96PU8 341 aaKnown RBP eCLIP17.95■□□□□ 0.463e-7■■■■■ 28.6
THUMPD2-201ENST00000378727 SEPT5Q99719 369 aaPredicted RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 OXCT2Q9BYC2 517 aaPredicted RBP17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 ARHGEF38Q9NXL2 777 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 NINJ2Q9NZG7 142 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 GMIPQ9P107 970 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 MTRRQ9UBK8 725 aa17.95■□□□□ 0.46
THUMPD2-201ENST00000378727 WDR27A2RRH5 827 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 ACSL3O95573 720 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 ACRP10323 421 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 RPL17P18621 184 aaKnown RBP17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 HCAR3P49019 387 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 IFFO1Q0D2I5 559 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 SMARCB1Q12824 385 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 DUSP4Q13115 394 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 PAFAH1B3Q15102 231 aaKnown RBP17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 SLC8B1Q6J4K2 584 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 DENND5BQ6ZUT9 1274 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 ATP6V1G3Q96LB4 118 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 OR12D3Q9UGF7 316 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 PTPRSQ13332 1948 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 GOLGA8MH3BSY2 632 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 NDC80O14777 642 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 TMEM63AO94886 807 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 RAG1P15918 1043 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 ERCC2P18074 760 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 TPI1P60174 286 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 TERF2Q15554 542 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 MFSD5Q6N075 450 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 HOOK3Q86VS8 718 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 RNF34Q969K3 372 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 SPATA17Q96L03 361 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 C9orf72Q96LT7 481 aa17.94■□□□□ 0.46
THUMPD2-201ENST00000378727 GOLGA6L10A6NI86 522 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 VAV1P15498 845 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 MAGEA4P43358 317 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 BASP1P80723 227 aaKnown RBP17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 PSMD5Q16401 504 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 KRT71Q3SY84 523 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 TP53INP2Q8IXH6 220 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 C2orf15Q8WU43 125 aaKnown RBP17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 LGMNQ99538 433 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 SAYSD1Q9NPB0 183 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 PAK5Q9P286 719 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 NR2E3Q9Y5X4 410 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 BACE2Q9Y5Z0 518 aa17.93■□□□□ 0.46
THUMPD2-201ENST00000378727 LRIG2O94898 1065 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 YWHAQP27348 245 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 KCNJ11Q14654 390 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 FASTKD3Q14CZ7 662 aaKnown RBP17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 BRMS1LQ5PSV4 323 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 MSANTD2Q6P1R3 559 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 SLC39A11Q8N1S5 342 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 CCDC110Q8TBZ0 833 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 OSBPL2Q9H1P3 480 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 CENPHQ9H3R5 247 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 MRPL42Q9Y6G3 142 aaKnown RBP17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 HACD1B0YJ81 288 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 C2CD2LO14523 706 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 ATF6P18850 670 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 OR1D2P34982 312 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 PRKD1Q15139 912 aaPredicted RBP17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 FNBP1LQ5T0N5 605 aa17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 SPOUT1Q5T280 376 aaKnown RBP17.92■□□□□ 0.46
THUMPD2-201ENST00000378727 ARTNQ5T4W7 220 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms