RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MCEEQ96PE7 176 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 IRX2Q9BZI1 471 aaPredicted RBP19.47■□□□□ 0.71
SSU72-203ENST00000378725 ARHGEF38Q9NXL2 777 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 MARK1Q9P0L2 795 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 SCINQ9Y6U3 715 aa19.47■□□□□ 0.71
SSU72-203ENST00000378725 SYNJ2BP-COX16A0A087WUM0 186 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 HOXC11O43248 304 aaPredicted RBP19.46■□□□□ 0.71
SSU72-203ENST00000378725 ATMINO43313 823 aaPredicted RBP19.46■□□□□ 0.71
SSU72-203ENST00000378725 GPR37L1O60883 481 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 APOEP02649 317 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 ADH5P11766 374 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 ABCB4P21439 1286 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 RDXP35241 583 aaKnown RBP19.46■□□□□ 0.71
SSU72-203ENST00000378725 GAD2Q05329 585 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 BRMS1LQ5PSV4 323 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 NADSYN1Q6IA69 706 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 DCUN1D2Q6PH85 259 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 ZNF852Q6ZMS4 543 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 SND1Q7KZF4 910 aaKnown RBP eCLIP19.46■□□□□ 0.71
SSU72-203ENST00000378725 STRADAQ7RTN6 431 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 TMTC1Q8IUR5 882 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 ATP6V0D2Q8N8Y2 350 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 FAM3CQ92520 227 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 WDCPQ9H6R7 721 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 MRPL47Q9HD33 250 aaKnown RBP19.46■□□□□ 0.71
SSU72-203ENST00000378725 C11orf16Q9NQ32 467 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 SPTLC3Q9NUV7 552 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 COX16Q9P0S2 106 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 SLC12A6Q9UHW9 1150 aa19.46■□□□□ 0.71
SSU72-203ENST00000378725 BDP1A6H8Y1 2624 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 KANSL1LA0AUZ9 987 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 TRDMT1O14717 391 aaKnown RBP19.45■□□□□ 0.7
SSU72-203ENST00000378725 LCA5LO95447 670 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 ATXN1P54253 815 aaKnown RBP19.45■□□□□ 0.7
SSU72-203ENST00000378725 ATP11AP98196 1134 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 OGDHQ02218 1023 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 C15orf59Q2T9L4 293 aaPredicted RBP19.45■□□□□ 0.7
SSU72-203ENST00000378725 FAM133BQ5BKY9 247 aaKnown RBP19.45■□□□□ 0.7
SSU72-203ENST00000378725 C10orf76Q5T2E6 689 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 SH3PXD2AQ5TCZ1 1133 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 TXNDC11Q6PKC3 985 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 TPGS1Q6ZTW0 290 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 ZNF687Q8N1G0 1237 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 FNIP1Q8TF40 1166 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 RNF34Q969K3 372 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 P2RY11Q96G91 374 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 NELL2Q99435 816 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 CNPY3Q9BT09 278 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 TBC1D17Q9HA65 648 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 MYO1AQ9UBC5 1043 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 XPO7Q9UIA9 1087 aaKnown RBP19.45■□□□□ 0.7
SSU72-203ENST00000378725 PAXBP1Q9Y5B6 917 aa19.45■□□□□ 0.7
SSU72-203ENST00000378725 NCOR1O75376 2440 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 GOLGA6L7A0A1B0GV03 622 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 PDGFBP01127 241 aaPredicted RBP19.44■□□□□ 0.7
SSU72-203ENST00000378725 PENKP01210 267 aaPredicted RBP19.44■□□□□ 0.7
SSU72-203ENST00000378725 H2AFZP0C0S5 128 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 CD72P21854 359 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 SLC6A4P31645 630 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 OPRD1P41143 372 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 EIF2DP41214 584 aaKnown RBP19.44■□□□□ 0.7
SSU72-203ENST00000378725 MRE11P49959 708 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 GALK1P51570 392 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 RAB6CQ53S08 254 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 FYB2Q5VWT5 728 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 H2AFVQ71UI9 128 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 TMEM139Q8IV31 216 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 ARHGEF26Q96DR7 871 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 PRMT1Q99873 361 aaKnown RBP19.44■□□□□ 0.7
SSU72-203ENST00000378725 DDX50Q9BQ39 737 aaKnown RBP19.44■□□□□ 0.7
SSU72-203ENST00000378725 C1QTNF1Q9BXJ1 281 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 PACSIN1Q9BY11 444 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 OSBPL6Q9BZF3 934 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 RAB6CQ9H0N0 254 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 ANLNQ9NQW6 1124 aa19.44■□□□□ 0.7
SSU72-203ENST00000378725 MRPS17Q9Y2R5 130 aaKnown RBP19.44■□□□□ 0.7
SSU72-203ENST00000378725 MUC3AQ02505 3323 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 TICRRQ7Z2Z1 1910 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 GOLGA6L6A8MZA4 724 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 I6L893 689 aaPredicted RBP19.43■□□□□ 0.7
SSU72-203ENST00000378725 CCP110O43303 1012 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 MOCS2O96007 188 aaPredicted RBP19.43■□□□□ 0.7
SSU72-203ENST00000378725 TMEM253P0C7T8 217 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 VCPP55072 806 aaKnown RBP19.43■□□□□ 0.7
SSU72-203ENST00000378725 HDAC4P56524 1084 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 GSDMDP57764 484 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 ANO4Q32M45 955 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 MPPE1Q53F39 396 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 PIK3R6Q5UE93 754 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 ETFBKMTQ8IXQ9 262 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 FAM172AQ8WUF8 416 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 PBXIP1Q96AQ6 731 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 TMA16Q96EY4 203 aaKnown RBP19.43■□□□□ 0.7
SSU72-203ENST00000378725 BAG1Q99933 345 aaPredicted RBP19.43■□□□□ 0.7
SSU72-203ENST00000378725 BBS2Q9BXC9 721 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 TRIM7Q9C029 511 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 TKTL2Q9H0I9 626 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 LTB4R2Q9NPC1 389 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 FBXO10Q9UK96 956 aa19.43■□□□□ 0.7
SSU72-203ENST00000378725 INTUQ9ULD6 942 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms