RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 MARC1Q5VT66 337 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 LRRC34Q8IZ02 419 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 RASGEF1CQ8N431 466 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 CALML6Q8TD86 181 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 NDRG1Q92597 394 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 UROC1Q96N76 676 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 ECT2Q9H8V3 914 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 DRG1Q9Y295 367 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC27A5Q9Y2P5 690 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 SF3B1O75533 1304 aaKnown RBP eCLIP14.6□□□□□ -0.071e-8■■■■■ 103.4
SHROOM1-203ENST00000378679 XPO1O14980 1071 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 RAMP2O60895 175 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 UNGP13051 313 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 GFAPP14136 432 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC20A2Q08357 652 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 TMEM63BQ5T3F8 832 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 ZC3H3Q8IXZ2 948 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 PPP2R3CQ969Q6 453 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 BORCS6Q96GS4 357 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 PRDM12Q9H4Q4 367 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 CNGB3Q9NQW8 809 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 ENTPD7Q9NQZ7 604 aa14.6□□□□□ -0.07
SHROOM1-203ENST00000378679 F2P00734 622 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 GOT1P17174 413 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 TAPT1Q6NXT6 567 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 B3GNT9Q6UX72 402 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 ACAD11Q709F0 780 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 TAS1R3Q7RTX0 852 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 CPNE8Q86YQ8 564 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 NETO2Q8NC67 525 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 DDI1Q8WTU0 396 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 GPR63Q9BZJ6 419 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 ATXN3LQ9H3M9 355 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 FAM96AQ9H5X1 160 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 DDX20Q9UHI6 824 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC24A2Q9UI40 661 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 KIAA0100Q14667 2235 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 CBX4O00257 560 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 IGF2BP3O00425 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 OR1E1P30953 314 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 BMPR2Q13873 1038 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 DDR2Q16832 855 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 ZCCHC9Q8N567 271 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 TSPAN18Q96SJ8 248 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 EGFL8Q99944 293 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 F8W8V4 182 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 AOC2O75106 756 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 ZWINTO95229 277 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 LMO2P25791 158 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 TAF5Q15542 800 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 SLC45A4Q5BKX6 768 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 FICDQ9BVA6 458 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 DPEP3Q9H4B8 488 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 STXBP5LQ9Y2K9 1186 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 GOLGA4Q13439 2230 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 NAV1Q8NEY1 1877 aa14.59□□□□□ -0.07
SHROOM1-203ENST00000378679 SPECC1L-ADORA2AF8WAN1 911 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 RTN3O95197 1032 aaPredicted RBP14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 ERCC2P18074 760 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 OXCT1P55809 520 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 POU6F1Q14863 301 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 CDCA2Q69YH5 1023 aaPredicted RBP14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 UNC45BQ8IWX7 931 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 SGF29Q96ES7 293 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 WWP1Q9H0M0 922 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 HIPK3Q9H422 1215 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 VPS28Q9UK41 221 aa14.58□□□□□ -0.07
SHROOM1-203ENST00000378679 STX7O15400 261 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 INHAP05111 366 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 RHOCP08134 193 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 CFHP08603 1231 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 OR4Q2P0C623 313 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 DBN1Q16643 649 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 RASAL3Q86YV0 1011 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 HMGXB4Q9UGU5 601 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 ASPAP45381 313 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 AARSP49588 968 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 RENBPP51606 427 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 ST8SIA6P61647 398 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 PDAP1Q13442 181 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 LAMB3Q13751 1172 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 FSCBQ5H9T9 825 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 HABP4Q5JVS0 413 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 CES3Q6UWW8 571 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 CRELD2Q6UXH1 353 aaPredicted RBP14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 CARNMT1Q8N4J0 409 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 LZTR1Q8N653 840 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 ALLCQ8N6M5 410 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 DTX3LQ8TDB6 740 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 MOSPD1Q9UJG1 213 aa14.58□□□□□ -0.08
SHROOM1-203ENST00000378679 TIAM2Q8IVF5 1701 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 ARL5CA6NH57 179 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 MYL4P12829 197 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 KPNA1P52294 538 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 ACLYP53396 1101 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 KIF19Q2TAC6 998 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 DDX53Q86TM3 631 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 ATAD1Q8NBU5 361 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 GPR152Q8TDT2 470 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 FNIP1Q8TF40 1166 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms