RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 GOLGA8QA0A0J9YX86 632 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 GOLGA8OA6NCC3 632 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 GOLGA8NF8WBI6 632 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 PDE5AO76074 875 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 USP1O94782 785 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 UBTFL6P0CB48 400 aaPredicted RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 CYP2C9P11712 490 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 MAP3K7CLP57077 242 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 WDR75Q8IWA0 830 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 MZB1Q8WU39 189 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 GCOM2Q9BZD3 368 aaPredicted RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 WWP1Q9H0M0 922 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 DCLRE1BQ9H816 532 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 DTLQ9NZJ0 730 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 TXNDC9O14530 226 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 ITM2AO43736 263 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 MFSD11O43934 449 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 TGM2P21980 687 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 SNX16P57768 344 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 ITGA9Q13797 1035 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 ACAP1Q15027 740 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 IL31Q6EBC2 164 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 TMEM154Q6P9G4 183 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 CYP4V2Q6ZWL3 525 aaPredicted RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 PIGZQ86VD9 579 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 RBM15BQ8NDT2 890 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 APPL2Q8NEU8 664 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 DDX50Q9BQ39 737 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 C20orf27Q9GZN8 174 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 CAB39LQ9H9S4 337 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 INPP5FQ9Y2H2 1132 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 SNX10Q9Y5X0 201 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 POLR2AP24928 1970 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 SPAG6O75602 509 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 SRGAP2BP0DMP2 458 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 L1CAMP32004 1257 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 NEK3P51956 506 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 MCCD1P59942 119 aaPredicted RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 MRPS5P82675 430 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 CRYMQ14894 314 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 FBXO47Q5MNV8 452 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 NOL9Q5SY16 702 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 NXNQ6DKJ4 435 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 ARHGAP24Q8N264 748 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 GPRC5AQ8NFJ5 357 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 OR52K1Q8NGK4 314 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 SCG3Q8WXD2 468 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 CELF6Q96J87 481 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 PRDM12Q9H4Q4 367 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 KCNK13Q9HB14 408 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 XAB2Q9HCS7 855 aaKnown RBP13.33□□□□□ -0.28
USP11-204ENST00000377107 PNPOQ9NVS9 261 aa13.33□□□□□ -0.28
USP11-204ENST00000377107 A0A0G2JLL6 359 aaPredicted RBP13.32□□□□□ -0.28
USP11-204ENST00000377107 SERPINB6P35237 376 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 GLRBP48167 497 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 ZRSR2Q15696 482 aaKnown RBP13.32□□□□□ -0.28
USP11-204ENST00000377107 RWDD4Q6NW29 188 aaKnown RBP13.32□□□□□ -0.28
USP11-204ENST00000377107 PRRT2Q7Z6L0 340 aaPredicted RBP13.32□□□□□ -0.28
USP11-204ENST00000377107 SLC26A7Q8TE54 656 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 SCYL1Q96KG9 808 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 ZFP42Q96MM3 310 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 NMRK1Q9NWW6 199 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 APOBEC2Q9Y235 224 aaKnown RBP13.32□□□□□ -0.28
USP11-204ENST00000377107 CITO14578 2027 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 RFPL1O75677 317 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 C6orf222P0C671 652 aaPredicted RBP13.32□□□□□ -0.28
USP11-204ENST00000377107 ZCCHC18P0CG32 403 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 DEUP1Q05D60 604 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 RGS9BPQ6ZS82 235 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 SAR1AQ9NR31 198 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 SYBUQ9NX95 663 aa13.32□□□□□ -0.28
USP11-204ENST00000377107 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 KPNA7A9QM74 516 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 GABBR2O75899 941 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 DGKIO75912 1065 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 CTSHP09668 335 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 AVPR1AP37288 418 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 ETV4P43268 484 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 USP4Q13107 963 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 DLG2Q15700 870 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 ZNF354CQ86Y25 554 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 TRIM42Q8IWZ5 723 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 UCMAQ8WVF2 138 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 P2RY11Q96G91 374 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
USP11-204ENST00000377107 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 EME2A4GXA9 379 aaPredicted RBP13.31□□□□□ -0.28
USP11-204ENST00000377107 SDR42E2A6NKP2 422 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 E9PBE3 544 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 SMAPO00193 183 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 CFLARO15519 480 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 KLHL41O60662 606 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 TBX10O75333 385 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 IGFBP6P24592 240 aaPredicted RBP13.31□□□□□ -0.28
USP11-204ENST00000377107 GABRB2P47870 512 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 BST2Q10589 180 aaKnown RBP13.31□□□□□ -0.28
USP11-204ENST00000377107 HSP90AA5PQ58FG0 334 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 MTBPQ96DY7 904 aa13.31□□□□□ -0.28
USP11-204ENST00000377107 SIGLEC10Q96LC7 697 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms