RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ANKRD65E5RJM6 399 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 E7EVH7 732 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 CHRNB2P17787 502 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 COL9A1P20849 921 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 ADCY2Q08462 1091 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 ZNF394Q53GI3 561 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 ODF2Q5BJF6 829 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 GPR158Q5T848 1215 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 DENND2CQ68D51 928 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 CWF19L1Q69YN2 538 aaKnown RBP12.91□□□□□ -0.34
VRK3-202ENST00000377011 TXNDC8Q6A555 127 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 ZDHHC24Q6UX98 284 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 ELMOD1Q8N336 334 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 PRELID2Q8N945 189 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 MAIP1Q8WWC4 291 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 PBXIP1Q96AQ6 731 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 CYFIP2Q96F07 1278 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 NOVA2Q9UNW9 492 aaKnown RBP12.91□□□□□ -0.34
VRK3-202ENST00000377011 PCDHA3Q9Y5H8 950 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 TICRRQ7Z2Z1 1910 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 NUP210Q8TEM1 1887 aaPredicted RBP12.91□□□□□ -0.34
VRK3-202ENST00000377011 MAN1A1P33908 653 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 GRIK1P39086 918 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 CDR2Q01850 454 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 SYDE1Q6ZW31 735 aaPredicted RBP12.91□□□□□ -0.34
VRK3-202ENST00000377011 NOP9Q86U38 636 aaKnown RBP12.91□□□□□ -0.34
VRK3-202ENST00000377011 ARID3BQ8IVW6 561 aaPredicted RBP12.91□□□□□ -0.34
VRK3-202ENST00000377011 SIX5Q8N196 739 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 FBXL13Q8NEE6 735 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 OR2W6PQ8NHA6 318 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 ZFYVE19Q96K21 471 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 SMOQ99835 787 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 NIF3L1Q9GZT8 377 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 CENPHQ9H3R5 247 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 GDE1Q9NZC3 331 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 GRHL1Q9NZI5 618 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 ATP8A1Q9Y2Q0 1164 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
VRK3-202ENST00000377011 KIF26AQ9ULI4 1882 aaPredicted RBP12.9□□□□□ -0.34
VRK3-202ENST00000377011 C2orf78A6NCI8 922 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 ZNF197O14709 1029 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 CILPO75339 1184 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 MICAL2O94851 1124 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 AGTP01019 485 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 SRFP11831 508 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 CD72P21854 359 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 COMTP21964 271 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 HNRNPH1P31943 449 aaKnown RBP12.9□□□□□ -0.34
VRK3-202ENST00000377011 MAGEA11P43364 429 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 PDE6CP51160 858 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
VRK3-202ENST00000377011 ZXDBP98169 803 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 INCA1Q0VD86 236 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 SMARCB1Q12824 385 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 C6orf118Q5T5N4 469 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 GPRIN1Q7Z2K8 1008 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 FAM35AQ86V20 835 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
VRK3-202ENST00000377011 UBALD2Q8IYN6 164 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 TMEM105Q8N8V8 129 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 MAB21L3Q8N8X9 362 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 ZNF564Q8TBZ8 553 aaPredicted RBP12.9□□□□□ -0.34
VRK3-202ENST00000377011 SLC2A14Q8TDB8 520 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 SMARCD2Q92925 531 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 MAGOHBQ96A72 148 aaKnown RBP12.9□□□□□ -0.34
VRK3-202ENST00000377011 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.34
VRK3-202ENST00000377011 CABS1Q96KC9 395 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 KREMEN1Q96MU8 473 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 NT5C1BQ96P26 610 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 EPB41L4BQ9H329 900 aa12.9□□□□□ -0.34
VRK3-202ENST00000377011 CACNA1HO95180 2353 aa12.9□□□□□ -0.35
VRK3-202ENST00000377011 FRYLO94915 3013 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 HEPACAM2A8MVW5 462 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 MYBL1P10243 752 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 ADORA2BP29275 332 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 SEC24CP53992 1094 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 RWDD2BP57060 319 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 FMO1Q01740 532 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 GCNT1Q02742 428 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 IFRD2Q12894 506 aaPredicted RBP12.89□□□□□ -0.35
VRK3-202ENST00000377011 ZNF211Q13398 564 aaPredicted RBP12.89□□□□□ -0.35
VRK3-202ENST00000377011 CCDC137Q6PK04 289 aaKnown RBP12.89□□□□□ -0.35
VRK3-202ENST00000377011 ITIH5Q86UX2 942 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 ZNF677Q86XU0 584 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 CRYBG2Q8N1P7 616 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 UBR7Q8N806 425 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 PCDHB18PQ96TA0 734 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 ROPN1BQ9BZX4 212 aaPredicted RBP12.89□□□□□ -0.35
VRK3-202ENST00000377011 CCDC134Q9H6E4 229 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 LRRC19Q9H756 370 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 ROPN1Q9HAT0 212 aaPredicted RBP12.89□□□□□ -0.35
VRK3-202ENST00000377011 CISHQ9NSE2 258 aa12.89□□□□□ -0.35
VRK3-202ENST00000377011 MTF2Q9Y483 593 aaPredicted RBP12.89□□□□□ -0.35
VRK3-202ENST00000377011 ZFP37Q9Y6Q3 630 aaPredicted RBP12.89□□□□□ -0.35
VRK3-202ENST00000377011 CAPN7Q9Y6W3 813 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms