RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ST3GAL2Q16842 350 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 SLC41A1Q8IVJ1 513 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 RGL4Q8IZJ4 473 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 SCML4Q8N228 414 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 KAT5Q92993 513 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 GTPBP2Q9BX10 602 aaKnown RBP21.96■■□□□ 1.11
VSX1-201ENST00000376707 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.96■■□□□ 1.11
VSX1-201ENST00000376707 CTNND2Q9UQB3 1225 aa21.96■■□□□ 1.11
VSX1-201ENST00000376707 TNRC6BQ9UPQ9 1833 aaKnown RBP21.95■■□□□ 1.1
VSX1-201ENST00000376707 BIN1O00499 593 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 MSI1O43347 362 aaKnown RBP21.95■■□□□ 1.1
VSX1-201ENST00000376707 TIMM44O43615 452 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 BRD2P25440 801 aaKnown RBP21.95■■□□□ 1.1
VSX1-201ENST00000376707 ENPP2Q13822 863 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 ZNF234Q14588 700 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 SYCP2LQ5T4T6 812 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 PMF1Q6P1K2 205 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 METTL3Q86U44 580 aaKnown RBP21.95■■□□□ 1.1
VSX1-201ENST00000376707 RBBP8NLQ8NC74 664 aaPredicted RBP21.95■■□□□ 1.1
VSX1-201ENST00000376707 DEFB124Q8NES8 71 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 SLC35F5Q8WV83 523 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 IRGQQ8WZA9 623 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 GOLGA1Q92805 767 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 FOXJ1Q92949 421 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 MKRN2Q9H000 416 aaKnown RBP21.95■■□□□ 1.1
VSX1-201ENST00000376707 FSCN3Q9NQT6 498 aa21.95■■□□□ 1.1
VSX1-201ENST00000376707 RNF225M0QZC1 329 aaPredicted RBP21.94■■□□□ 1.1
VSX1-201ENST00000376707 PIK3R2O00459 728 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 LATS1O95835 1130 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 GNA14O95837 355 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 HOXD9P28356 352 aaPredicted RBP21.94■■□□□ 1.1
VSX1-201ENST00000376707 CD6P30203 668 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 MARSP56192 900 aaKnown RBP21.94■■□□□ 1.1
VSX1-201ENST00000376707 UBE2HP62256 183 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 PAK1Q13153 545 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 ADGRF1Q5T601 910 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 SERPINA13PQ6UXR4 307 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 RRAGAQ7L523 313 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 HDDC3Q8N4P3 179 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 LMO3Q8TAP4 145 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 SORCS1Q8WY21 1168 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 TMA16Q96EY4 203 aaKnown RBP21.94■■□□□ 1.1
VSX1-201ENST00000376707 ZNF419Q96HQ0 510 aaPredicted RBP21.94■■□□□ 1.1
VSX1-201ENST00000376707 SLC32A1Q9H598 525 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 CAPN10Q9HC96 672 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 STOML2Q9UJZ1 356 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 EPG5Q9HCE0 2579 aa21.94■■□□□ 1.1
VSX1-201ENST00000376707 EPHX1P07099 455 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 STX17P56962 302 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 GCNT1Q02742 428 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 FOXC1Q12948 553 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 WDR45BQ5MNZ6 344 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 TMEM215Q68D42 235 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 MSANTD2Q6P1R3 559 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 TMPRSS6Q8IU80 811 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 ARHGEF19Q8IW93 802 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 TRIM59Q8IWR1 403 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 EHBP1Q8NDI1 1231 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 PRCCQ92733 491 aaPredicted RBP21.93■■□□□ 1.1
VSX1-201ENST00000376707 SIPA1Q96FS4 1042 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 TOE1Q96GM8 510 aaKnown RBP21.93■■□□□ 1.1
VSX1-201ENST00000376707 ZSWIM1Q9BR11 485 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 ITM2CQ9NQX7 267 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 USP36Q9P275 1121 aaKnown RBP21.93■■□□□ 1.1
VSX1-201ENST00000376707 SUSD2Q9UGT4 822 aa21.93■■□□□ 1.1
VSX1-201ENST00000376707 GABBR2O75899 941 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 CALCAP01258 141 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 LTFP02788 710 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 SYPP08247 313 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 NCAM1P13591 858 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 PRKCHP24723 683 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 KCNH2Q12809 1159 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 WFIKKN2Q8TEU8 576 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 HSFY1Q96LI6 401 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 CHMP5Q9NZZ3 219 aa21.92■■□□□ 1.1
VSX1-201ENST00000376707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.92■■□□□ 1.1
VSX1-201ENST00000376707 MEI4A8MW99 385 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 ARHGAP33O14559 1287 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 OPHN1O60890 802 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 KRT37O76014 449 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 FBXO21O94952 628 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 AFPP02771 609 aaKnown RBP21.91■■□□□ 1.1
VSX1-201ENST00000376707 ACADMP11310 421 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 GNSP15586 552 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 HLA-FP30511 346 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 SLC11A2P49281 568 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 PLEKHG6Q3KR16 790 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 NUGGCQ68CJ6 796 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 CACUL1Q86Y37 369 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 UNC45BQ8IWX7 931 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 MINDY1Q8N5J2 469 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 CLEC4CQ8WTT0 213 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 GPR174Q9BXC1 333 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 MIS12Q9H081 205 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 ABCB8Q9NUT2 735 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 WSB2Q9NYS7 404 aaPredicted RBP21.91■■□□□ 1.1
VSX1-201ENST00000376707 KIAA1468Q9P260 1216 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 PLA2G4CQ9UP65 541 aa21.91■■□□□ 1.1
VSX1-201ENST00000376707 CHD8Q9HCK8 2581 aa21.9■■□□□ 1.1
VSX1-201ENST00000376707 OXTRP30559 389 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms