RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ANKRD6Q9Y2G4 727 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 A0A088AWK7 358 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 MYMKA6NI61 221 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.36
VPS13A-204ENST00000376634 ZNF10P21506 573 aaPredicted RBP12.77□□□□□ -0.36
VPS13A-204ENST00000376634 STAT5AP42229 794 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 HALP42357 657 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 RHAGQ02094 409 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 AGKQ53H12 422 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 TAF8Q7Z7C8 310 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 SETD9Q8NE22 299 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 ZNF671Q8TAW3 534 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 ATP8B4Q8TF62 1192 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 MPP4Q96JB8 637 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 NUDT12Q9BQG2 462 aa12.77□□□□□ -0.36
VPS13A-204ENST00000376634 CCNI2Q6ZMN8 369 aaPredicted RBP12.77□□□□□ -0.37
VPS13A-204ENST00000376634 HAO1Q9UJM8 370 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 PCDHB12Q9Y5F1 795 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 ALG6Q9Y672 507 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 GMEB1Q9Y692 573 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 LRRC14BA6NHZ5 514 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 GPR182O15218 404 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 EFEMP1Q12805 493 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 OVGP1Q12889 678 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 ACAD10Q6JQN1 1059 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 POLR1BQ9H9Y6 1135 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 FMN2Q9NZ56 1722 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 AP1S2P56377 157 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 CHST13Q8NET6 341 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 ZIM3Q96PE6 472 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 EPB41L4BQ9H329 900 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 THG1LQ9NWX6 298 aaKnown RBP12.77□□□□□ -0.37
VPS13A-204ENST00000376634 GPRC5DQ9NZD1 345 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 ROBO2Q9HCK4 1378 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 F9P00740 461 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 KCNJ1P48048 391 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 ADSSL1Q8N142 457 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPS13A-204ENST00000376634 KAT2BQ92831 832 aa12.77□□□□□ -0.37
VPS13A-204ENST00000376634 NDUFB10O96000 172 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 TMEM253P0C7T8 217 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ARF5P84085 180 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 TBC1D13Q9NVG8 400 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 TSPAN19P0C672 248 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 BCAP31P51572 246 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ALG11Q2TAA5 492 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ZSWIM1Q9BR11 485 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 GSSP48637 474 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 RPL10AP62906 217 aaKnown RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 CRB1P82279 1406 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 RORBQ92753 470 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ACSF2Q96CM8 615 aaPredicted RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 PHF20Q9BVI0 1012 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ANKEF1Q9NU02 776 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ENTPD4Q9Y227 616 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 LGALS3BPQ08380 585 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 TRIT1Q9H3H1 467 aaKnown RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 CYLDQ9NQC7 956 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 RAD51BO15315 384 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 SCTRP47872 440 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 FGD3Q5JSP0 725 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 FBXO42Q6P3S6 717 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 CYB5D1Q6P9G0 228 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 FBXO36Q8NEA4 188 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ACOX2Q99424 681 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 PPLO60437 1756 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 FOSL2P15408 326 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 NECAB2Q7Z6G3 386 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 TDRKHQ9Y2W6 561 aaKnown RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 CBX4O00257 560 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 CES2O00748 559 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 CYB561D2O14569 222 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 MPOP05164 745 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 TNNI3P19429 210 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 FASP25445 335 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 C11orf63Q6NUN7 778 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ERO1BQ86YB8 467 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 CD302Q8IX05 232 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 STARD8Q92502 1023 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 TMEM159Q96B96 161 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 PABPC3Q9H361 631 aaKnown RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 KLK14Q9P0G3 267 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 UMPSP11172 480 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 GPR15P49685 360 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 ILF2Q12905 390 aaKnown RBP12.76□□□□□ -0.37
VPS13A-204ENST00000376634 O00370 1275 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 NR2C2P49116 596 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 FCGRTP55899 365 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 FMR1Q06787 632 aaKnown RBP eCLIP12.76□□□□□ -0.373e-6■■■■□ 26.4
VPS13A-204ENST00000376634 C16orf86Q6ZW13 317 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 KCNH7Q9NS40 1196 aa12.76□□□□□ -0.37
VPS13A-204ENST00000376634 A0A087WZ62 844 aa12.75□□□□□ -0.37
VPS13A-204ENST00000376634 INPP4BO15327 924 aa12.75□□□□□ -0.37
VPS13A-204ENST00000376634 GYPCP04921 128 aa12.75□□□□□ -0.37
VPS13A-204ENST00000376634 LPIN1Q14693 890 aa12.75□□□□□ -0.37
VPS13A-204ENST00000376634 ACOX1Q15067 660 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms