RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 SGO2Q562F6 1265 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 SERPINA13PQ6UXR4 307 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 RAB44Q7Z6P3 723 aaPredicted RBP24.26■■□□□ 1.47
C9orf47-202ENST00000375850 SCML4Q8N228 414 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 RBBP8NLQ8NC74 664 aaPredicted RBP24.26■■□□□ 1.47
C9orf47-202ENST00000375850 RNF139Q8WU17 664 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 ERLEC1Q96DZ1 483 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 IPO9Q96P70 1041 aaKnown RBP24.26■■□□□ 1.47
C9orf47-202ENST00000375850 TSG101Q99816 390 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 GTPBP4Q9BZE4 634 aaKnown RBP24.26■■□□□ 1.47
C9orf47-202ENST00000375850 STOML2Q9UJZ1 356 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 KLK13Q9UKR3 277 aa24.26■■□□□ 1.47
C9orf47-202ENST00000375850 FAM208BQ5VWN6 2430 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 CER1O95813 267 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 C7P10643 843 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 COBLL1Q53SF7 1204 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 NAXDQ8IW45 347 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 ZNF557Q8N988 423 aaPredicted RBP24.25■■□□□ 1.47
C9orf47-202ENST00000375850 OR2I1PQ8NGU4 316 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 ARID3AQ99856 593 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 ULBP1Q9BZM6 244 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 TSPAN16Q9UKR8 245 aa24.25■■□□□ 1.47
C9orf47-202ENST00000375850 CEP192Q8TEP8 1941 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 SRRM3A6NNA2 597 aaPredicted RBP24.24■■□□□ 1.47
C9orf47-202ENST00000375850 SH3BP5O60239 455 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 EPHX1P07099 455 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 SETSIPP0DME0 302 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 TBXAS1P24557 533 aaPredicted RBP24.24■■□□□ 1.47
C9orf47-202ENST00000375850 COPAP53621 1224 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 CUL2Q13617 745 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 GOLGA7BQ2TAP0 167 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 DCAF12L1Q5VU92 463 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 FMNL3Q8IVF7 1028 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 OR2T3Q8NH03 318 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 ADAMTS14Q8WXS8 1223 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 KCTD13Q8WZ19 329 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 TATDN2Q93075 761 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 CNGB3Q9NQW8 809 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 ABCC13Q9NSE7 274 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 PLA2G4CQ9UP65 541 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 CACNA1EQ15878 2313 aa24.24■■□□□ 1.47
C9orf47-202ENST00000375850 IGF2RP11717 2491 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 KCNJ18B7U540 433 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 BCAT2O15382 392 aaPredicted RBP24.23■■□□□ 1.47
C9orf47-202ENST00000375850 MAOBP27338 520 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 FAM193AP78312 1265 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 FKBP3Q00688 224 aaKnown RBP24.23■■□□□ 1.47
C9orf47-202ENST00000375850 ZBTB16Q05516 673 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 CAMK2GQ13555 558 aaPredicted RBP24.23■■□□□ 1.47
C9orf47-202ENST00000375850 TCERG1LQ5VWI1 586 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 GLRX5Q86SX6 157 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 SIX6OS1Q8N1H7 587 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 CHCHD4Q8N4Q1 142 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 ZCCHC9Q8N567 271 aaKnown RBP24.23■■□□□ 1.47
C9orf47-202ENST00000375850 APOBEC2Q9Y235 224 aaKnown RBP24.23■■□□□ 1.47
C9orf47-202ENST00000375850 ZDHHC9Q9Y397 364 aa24.23■■□□□ 1.47
C9orf47-202ENST00000375850 VDRP11473 427 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 PRKCHP24723 683 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 HOXD9P28356 352 aaPredicted RBP24.22■■□□□ 1.47
C9orf47-202ENST00000375850 DCAF17Q5H9S7 520 aaPredicted RBP24.22■■□□□ 1.47
C9orf47-202ENST00000375850 MPP7Q5T2T1 576 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 ADGRF1Q5T601 910 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 BSPRYQ5W0U4 402 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 BHLHA9Q7RTU4 235 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 AHI1Q8N157 1196 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.22■■□□□ 1.47
C9orf47-202ENST00000375850 TMA16Q96EY4 203 aaKnown RBP24.22■■□□□ 1.47
C9orf47-202ENST00000375850 MIR1-1HGQ9H1L0 117 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 GOLPH3LQ9H4A5 285 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 CLEC4EQ9ULY5 219 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 PCDHGB2Q9Y5G2 931 aa24.22■■□□□ 1.47
C9orf47-202ENST00000375850 CD19P15391 556 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 MATKP42679 507 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 LRRC63Q05C16 580 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 ADIGQ0VDE8 80 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 CBWD6Q4V339 395 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 CBWD3Q5JTY5 395 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 CBWD5Q5RIA9 395 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 ZNF658Q5TYW1 1059 aaPredicted RBP24.21■■□□□ 1.47
C9orf47-202ENST00000375850 TMEM215Q68D42 235 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 ZC3H3Q8IXZ2 948 aaKnown RBP24.21■■□□□ 1.47
C9orf47-202ENST00000375850 EEF2KMTQ96G04 330 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 GSDMAQ96QA5 445 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 LHX5Q9H2C1 402 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 TMEM245Q9H330 911 aa24.21■■□□□ 1.47
C9orf47-202ENST00000375850 ATP5BP06576 529 aaKnown RBP24.2■■□□□ 1.46
C9orf47-202ENST00000375850 FTH1P19P0C7X4 201 aa24.2■■□□□ 1.46
C9orf47-202ENST00000375850 HLA-FP30511 346 aa24.2■■□□□ 1.46
C9orf47-202ENST00000375850 UNC45BQ8IWX7 931 aa24.2■■□□□ 1.46
C9orf47-202ENST00000375850 IRGQQ8WZA9 623 aa24.2■■□□□ 1.46
C9orf47-202ENST00000375850 GOLGA1Q92805 767 aa24.2■■□□□ 1.46
C9orf47-202ENST00000375850 OSGEPQ9NPF4 335 aa24.2■■□□□ 1.46
C9orf47-202ENST00000375850 ARMCX3Q9UH62 379 aaPredicted RBP24.2■■□□□ 1.46
C9orf47-202ENST00000375850 O00370 1275 aa24.19■■□□□ 1.46
C9orf47-202ENST00000375850 IRAK2O43187 625 aa24.19■■□□□ 1.46
C9orf47-202ENST00000375850 CBFA2T3O75081 653 aa24.19■■□□□ 1.46
C9orf47-202ENST00000375850 PAEPP09466 180 aa24.19■■□□□ 1.46
C9orf47-202ENST00000375850 PRCPP42785 496 aa24.19■■□□□ 1.46
C9orf47-202ENST00000375850 AFF3P51826 1226 aaKnown RBP24.19■■□□□ 1.46
C9orf47-202ENST00000375850 STILQ15468 1287 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms