RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 PRR5-ARHGAP8B1AHC4 643 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 SUPT3HB4E1H0 165 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 NDUFS3O75489 264 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 MPOP05164 745 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 PCYT1AP49585 367 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 SLC26A2P50443 739 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 ARHGAP8P85298 464 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 CSHL1Q14406 222 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 KIAA1841Q6NSI8 718 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 ZFP1Q6P2D0 407 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 ARCQ7LC44 396 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 LENG9Q96B70 501 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 COPS7BQ9H9Q2 264 aaPredicted RBP17.25■□□□□ 0.35
VARS-215ENST00000375663 NMRAL1Q9HBL8 299 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 XPNPEP3Q9NQH7 507 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.25■□□□□ 0.35
VARS-215ENST00000375663 ITGA11Q9UKX5 1188 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 MYL4P12829 197 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 HMOX2P30519 316 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 NME5P56597 212 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 CPT1BQ92523 772 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 CPNE1Q99829 537 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 ECSITQ9BQ95 431 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
VARS-215ENST00000375663 UBE2OQ9C0C9 1292 aaKnown RBP17.25■□□□□ 0.35
VARS-215ENST00000375663 UBDO15205 165 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
VARS-215ENST00000375663 RTP1P59025 263 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 SLC44A4Q53GD3 710 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 ZNF555Q8NEP9 628 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 ASPSCR1Q9BZE9 553 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 ST6GALNAC4Q9H4F1 302 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 AP4S1Q9Y587 144 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 DPPA5A6NC42 116 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 PGM3O95394 542 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 SERPINA6P08185 405 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 RPS12P25398 132 aaKnown RBP17.24■□□□□ 0.35
VARS-215ENST00000375663 MARK2Q7KZI7 788 aaKnown RBP17.24■□□□□ 0.35
VARS-215ENST00000375663 KCNMB4Q86W47 210 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 LRRN4Q8WUT4 740 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 USP6NLQ92738 828 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 EBNA1BP2Q99848 306 aaKnown RBP17.24■□□□□ 0.35
VARS-215ENST00000375663 NDFIP2Q9NV92 336 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 GOLGA8TH3BQL2 631 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 ABLIM1O14639 778 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 TOMM70O94826 608 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 CCNE2O96020 404 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 GEMP55040 296 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 KHDC1Q4VXA5 237 aaKnown RBP17.24■□□□□ 0.35
VARS-215ENST00000375663 SPDYAQ5MJ70 313 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 DIS3LQ8TF46 1054 aaKnown RBP17.24■□□□□ 0.35
VARS-215ENST00000375663 SLC44A1Q8WWI5 657 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 VPS50Q96JG6 964 aa17.24■□□□□ 0.35
VARS-215ENST00000375663 SNRNP25Q9BV90 132 aaKnown RBP17.24■□□□□ 0.35
VARS-215ENST00000375663 HEATR9A2RTY3 570 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 UPP2O95045 317 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 PIGNO95427 931 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 F9P00740 461 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 NFKBIAP25963 317 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 RNASEH2BQ5TBB1 312 aaKnown RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 LPCAT2Q7L5N7 544 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 SPATA2LQ8IUW3 424 aaPredicted RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 EFCAB3Q8N7B9 438 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 GSTCDQ8NEC7 633 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 BSNDQ8WZ55 320 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 NR1H4Q96RI1 486 aaPredicted RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 CLIC5Q9NZA1 410 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 SPATA31A6Q5VVP1 1343 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 ADGRA2Q96PE1 1338 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 INSRRP14616 1297 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 PPIDQ08752 370 aaKnown RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 POU6F1Q14863 301 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 PTPN20Q4JDL3 420 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 FKBP1CQ5VVH2 108 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 TDRPQ86YL5 185 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 ZFRQ96KR1 1074 aaKnown RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 RNPEPQ9H4A4 650 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 COL1A1P02452 1464 aaPredicted RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 HOXD13P35453 343 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 CDKN2BP42772 138 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 NAGLUP54802 743 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 CAPSQ13938 189 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 SPANXN3Q5MJ09 141 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 DAW1Q8N136 415 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 RBM15BQ8NDT2 890 aaKnown RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 KIF17Q9P2E2 1029 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 TJP2Q9UDY2 1190 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 ZNF229Q9UJW7 825 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 MAGEB16A2A368 324 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 KDM1AO60341 852 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 XPAP23025 273 aaPredicted RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 INPP1P49441 399 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 CCNHP51946 323 aaPredicted RBP17.23■□□□□ 0.35
VARS-215ENST00000375663 WASHC5Q12768 1159 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 ADGRD1Q6QNK2 874 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 TMC7Q7Z402 723 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 ZDHHC17Q8IUH5 632 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 GRIP2Q9C0E4 1043 aa17.23■□□□□ 0.35
VARS-215ENST00000375663 MAN1C1Q9NR34 630 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms