RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
MCF2L-202ENST00000375597 LPAR1Q92633 364 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 RNF34Q969K3 372 aa12.16□□□□□ -0.46
MCF2L-202ENST00000375597 KLRG2A4D1S0 409 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 MAGEA13PA6NCF6 341 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 CLDN5O00501 218 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 CHRNGP07510 517 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 IQCF3P0C7M6 154 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 HDCP19113 662 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 RPL10P27635 214 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 EFHC1Q5JVL4 640 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 IRGCQ6NXR0 463 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 FAM43BQ6ZT52 329 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 PCDH20Q8N6Y1 951 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 CCDC185Q8N715 623 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 OR52K1Q8NGK4 314 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 C18orf25Q96B23 403 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 NTPCRQ9BSD7 190 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 CDT1Q9H211 546 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 SAR1AQ9NR31 198 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 DRG1Q9Y295 367 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 ADCY6O43306 1168 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 LYPLA2O95372 231 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 CACNB2Q08289 660 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 SEPT6Q14141 434 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 CAND1Q86VP6 1230 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 SNX32Q86XE0 403 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 WDR49Q8IV35 697 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 PQLC3Q8N755 202 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 B4GALNT2Q8NHY0 566 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 RNF157Q96PX1 679 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 ACO2Q99798 780 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 MRPL45Q9BRJ2 306 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 ST6GALNAC4Q9H4F1 302 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 GTSE1Q9NYZ3 720 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 KCNG1Q9UIX4 513 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 NUDT5Q9UKK9 219 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 ZNF214Q9UL59 606 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 C3orf70A6NLC5 250 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 TMEM233B4DJY2 109 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 H0YCG3 227 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 STBD1O95210 358 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 HOXC6P09630 235 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 SRGAP2BP0DMP2 458 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 CNGA3Q16281 694 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 HSF5Q4G112 596 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 FRMD7Q6ZUT3 714 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 ST13P4Q8IZP2 240 aaPredicted RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 ZNF781Q8N8C0 355 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 COLGALT1Q8NBJ5 622 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 MPP4Q96JB8 637 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 PRPF18Q99633 342 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 KLHL4Q9C0H6 718 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 PAK5Q9P286 719 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 STX18Q9P2W9 335 aaKnown RBP12.15□□□□□ -0.46
MCF2L-202ENST00000375597 SIX4Q9UIU6 781 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 ADAMTS6Q9UKP5 1117 aa12.15□□□□□ -0.46
MCF2L-202ENST00000375597 SLC15A5A6NIM6 579 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 SLC10A2Q12908 348 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 PITRM1Q5JRX3 1037 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ZNF618Q5T7W0 954 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 PLD6Q8N2A8 252 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ALKBH8Q96BT7 664 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 VCPIP1Q96JH7 1222 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 CDRT15Q96T59 188 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 PCYT2Q99447 389 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 MED10Q9BTT4 135 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 PIF1Q9H611 641 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 XPNPEP3Q9NQH7 507 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 SYBUQ9NX95 663 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 SOX13Q9UN79 622 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 TEX264Q9Y6I9 313 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ATP6AP2A0A1C7CYW4 349 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 MAGEB2O15479 319 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 HNRNPRO43390 633 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 FOXD2O60548 495 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 PFDN1O60925 122 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 SIN3BO75182 1162 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 RFPL1O75677 317 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ATP6AP2O75787 350 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 TXNP10599 105 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 MPSTP25325 297 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 CASP2P42575 452 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 SCNN1BP51168 640 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 C6orf52Q5T4I8 152 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ZNF280DQ6N043 979 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ADGRF2Q8IZF7 708 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 TIPINQ9BVW5 301 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 TRIM8Q9BZR9 551 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 UBE2OQ9C0C9 1292 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 TASP1Q9H6P5 420 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 DHX33Q9H6R0 707 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 POPDC2Q9HBU9 364 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ARHGEF4Q9NR80 690 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 C20orf96Q9NUD7 363 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms