RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ARHGDIAP52565 204 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 BST2Q10589 180 aaKnown RBP6.71□□□□□ -1.33
SMC1A-202ENST00000375340 OR52K1Q8NGK4 314 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 PNPOQ9NVS9 261 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 ITGA11Q9UKX5 1188 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 PSMD3O43242 534 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 B4GALT5O43286 388 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 CFHP08603 1231 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 CYP2C9P11712 490 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 HMOX2P30519 316 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 ALDH1A3P47895 512 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 ZRANB3Q5FWF4 1079 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 IRGCQ6NXR0 463 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 NIPA1Q7RTP0 329 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 FAM13CQ8NE31 585 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 BHMTQ93088 406 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 MUC3BQ9H195 1237 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 COG4Q9H9E3 785 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 ZDHHC18Q9NUE0 388 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 TBC1D23Q9NUY8 699 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 UBIAD1Q9Y5Z9 338 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF839A8K0R7 811 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 ESRRBO95718 433 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 FAM58BPP0C7Q3 252 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF23P17027 643 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 MSX2P35548 267 aaPredicted RBP6.71□□□□□ -1.33
SMC1A-202ENST00000375340 HSPA13P48723 471 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 BCAT1P54687 386 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 MGAT5Q09328 741 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 CCDC153Q494R4 210 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 BRSK2Q8IWQ3 736 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 AGBL3Q8NEM8 1001 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 CDRT15Q96T59 188 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 DCUN1D5Q9BTE7 237 aa6.71□□□□□ -1.33
SMC1A-202ENST00000375340 ABI2Q9NYB9 513 aaPredicted RBP6.71□□□□□ -1.33
SMC1A-202ENST00000375340 MARF1Q9Y4F3 1742 aaKnown RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 CASTOR2A6NHX0 329 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SIGLEC16A6NMB1 481 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 ATP6V1C1P21283 382 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 DSG3P32926 999 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SWT1Q5T5J6 900 aaKnown RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 CRELD2Q6UXH1 353 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 C4orf22Q6V702 233 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 PHF13Q86YI8 300 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 HELQQ8TDG4 1101 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 PPP2R3CQ969Q6 453 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 FAM163AQ96GL9 167 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 IDI2Q9BXS1 227 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 NT5MQ9NPB1 228 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 ETAA1Q9NY74 926 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 TJP2Q9UDY2 1190 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 NOCTQ9UK39 431 aaKnown RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 MYH7BA7E2Y1 1941 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 AKAP11Q9UKA4 1901 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 WFS1O76024 890 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 CNTFP26441 200 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 TKTL1P51854 596 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 PLK1P53350 603 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 BST1Q10588 318 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 LINC00523Q86TU6 105 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 VCPIP1Q96JH7 1222 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 ATXN3LQ9H3M9 355 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 CATSPERBQ9H7T0 1116 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 COL20A1Q9P218 1284 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 MAST2Q6P0Q8 1798 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SUPT7LO94864 414 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 CCNE2O96020 404 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 USP17L7P0C7H9 530 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 FOXN2P32314 431 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SLC6A3Q01959 620 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 CCDC15Q0P6D6 951 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 ATP1A4Q13733 1029 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SPANXN3Q5MJ09 141 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 NAPEPLDQ6IQ20 393 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 ARHGAP22Q7Z5H3 698 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 PLD3Q8IV08 490 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 RIN3Q8TB24 985 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SLC2A14Q8TDB8 520 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 COPS5Q92905 334 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SERAC1Q96JX3 654 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 LRRC40Q9H9A6 602 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SLC17A6Q9P2U8 582 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SOX13Q9UN79 622 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 DPPA5A6NC42 116 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SPDYE5A6NIY4 337 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 TBC1D12O60347 775 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 NDUFS3O75489 264 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 COX4I1P13073 169 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 HOXD13P35453 343 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 CHN2P52757 468 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 C15orf52Q6ZUT6 534 aaKnown RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 SH3BP5LQ7L8J4 393 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 NDRG1Q92597 394 aaKnown RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 OSMRQ99650 979 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 GPRC5DQ9NZD1 345 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 WNT10BO00744 389 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 JCHAINP01591 159 aa6.71□□□□□ -1.34
SMC1A-202ENST00000375340 UBA1P22314 1058 aaKnown RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 ABCE1P61221 599 aaKnown RBP6.71□□□□□ -1.34
SMC1A-202ENST00000375340 BEGAINQ9BUH8 593 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms