RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 GON7Q9BXV9 100 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SHCBP1LQ9BZQ2 653 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SAV1Q9H4B6 383 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 SLA2Q9H6Q3 261 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 PCDHGB3Q9Y5G1 929 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 PNMA6EA0A0J9YXQ4 647 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 KPNA5O15131 536 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 CLPXO76031 633 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 RGS7P49802 495 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 IFI35P80217 286 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 SPDYE2Q495Y8 402 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ASPRV1Q53RT3 343 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SNRNP48Q6IEG0 339 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 CENPSQ8N2Z9 138 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 FAXDC2Q96IV6 333 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SMCO3A2RU48 225 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ELP6Q0PNE2 266 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 MAD2L1Q13257 205 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 ALX1Q15699 326 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 INO80DQ53TQ3 878 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 SATL1Q86VE3 508 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ZNF280BQ86YH2 543 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 MB21D2Q8IYB1 491 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 ANKRD53Q8N9V6 530 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 STARD8Q92502 1023 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 MED15Q96RN5 788 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 GDAP2Q9NXN4 497 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SHOC2Q9UQ13 582 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 MAB21L2Q9Y586 359 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 CASKIN1Q8WXD9 1431 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 CCRL2O00421 344 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 YKT6O15498 198 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ZNF3P17036 446 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SLC5A3P53794 718 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 BIKQ13323 160 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ANKDD1AQ495B1 522 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 INTS11Q5TA45 600 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 ANKRD40Q6AI12 368 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 INO80EQ8NBZ0 244 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 UXS1Q8NBZ7 420 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 DDX50Q9BQ39 737 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 H0YJX3 145 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 INPP4BO15327 924 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 FAM20BO75063 409 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 NR2C2P49116 596 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 NYXQ9GZU5 481 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 GANQ9H2C0 597 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 TBC1D14Q9P2M4 693 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 PMPCBO75439 489 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SERPINB5P36952 375 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 CCR3P51677 355 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 PITPNAQ00169 270 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 MPP2Q14168 576 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 TMPRSS11AQ6ZMR5 421 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 DNAJB7Q7Z6W7 309 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 IZUMO1Q8IYV9 350 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 EXD1Q8NHP7 514 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 KAT2BQ92831 832 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 DHX33Q9H6R0 707 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 RAB6BQ9NRW1 208 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ZNF521Q96K83 1311 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SBK2P0C263 348 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ETS1P14921 441 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 DLG2Q15700 870 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 NFIL3Q16649 462 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 LMBRD2Q68DH5 695 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 NECAB2Q7Z6G3 386 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 GJA10Q969M2 543 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 FOPNLQ96NB1 174 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ZNF347Q96SE7 839 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 CCDC195A0A1B0GUA6 201 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SYDE2Q5VT97 1194 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 EMC1Q8N766 993 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 LSM14AQ8ND56 463 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 IPCEF1Q8WWN9 437 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 PCYOX1Q9UHG3 505 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SLC15A1P46059 708 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ILF3Q12906 894 aaKnown RBP eCLIP6.77□□□□□ -1.33
UBR4-204ENST00000375254 TBX2Q13207 712 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 CASP12Q6UXS9 341 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 FAM92BQ6ZTR7 304 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 CPNE5Q9HCH3 593 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SEC14L4Q9UDX3 406 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 IFRD1O00458 451 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 STRIP1Q5VSL9 837 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 KSR1Q8IVT5 923 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ENGASEQ8NFI3 743 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ZNF518BQ9C0D4 1074 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 ARMC7Q9H6L4 198 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 COPS7BQ9H9Q2 264 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 FARSAQ9Y285 508 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 MAPKBP1O60336 1514 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 UBA6A0AVT1 1052 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 FAM25EA8MYX2 175 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 NCK2O43639 380 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 LRIG2O94898 1065 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 IFNA17P01571 189 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 GSTM5P46439 218 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 TAF5Q15542 800 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 DNAJA4Q8WW22 397 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms