RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 MRPL58Q14197 206 aaKnown RBP20.07■□□□□ 0.8
NECAB3-202ENST00000375238 FAM117BQ6P1L5 589 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 CENPUQ71F23 418 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 STRADAQ7RTN6 431 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 PPIL6Q8IXY8 311 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 CCDC13Q8IYE1 715 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 ZBED8Q8IZ13 594 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 TMEM199Q8N511 208 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 NAT8LQ8N9F0 302 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 BCL7CQ8WUZ0 217 aaPredicted RBP20.07■□□□□ 0.8
NECAB3-202ENST00000375238 SNRNP25Q9BV90 132 aaKnown RBP20.07■□□□□ 0.8
NECAB3-202ENST00000375238 KDM4CQ9H3R0 1056 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 MLXIPLQ9NP71 852 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 PCDH10Q9P2E7 1040 aa20.07■□□□□ 0.8
NECAB3-202ENST00000375238 OR6C75A6NL08 312 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 LTFP02788 710 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 ZC3H12AQ5D1E8 599 aaKnown RBP20.06■□□□□ 0.8
NECAB3-202ENST00000375238 SYPL2Q5VXT5 272 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 TMCO2Q7Z6W1 182 aaPredicted RBP20.06■□□□□ 0.8
NECAB3-202ENST00000375238 SCN4BQ8IWT1 228 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 DYDC1Q8WWB3 177 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 P3H4Q92791 437 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 TOP1MTQ969P6 601 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 PGLYRP2Q96PD5 576 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 ACTR5Q9H9F9 607 aaPredicted RBP20.06■□□□□ 0.8
NECAB3-202ENST00000375238 SYNJ2BP-COX16A0A087WUM0 186 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 GOLGA6L7A0A1B0GV03 622 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 CCT8L1PA6NM43 557 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 TCP11X1B4DZS4 312 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 GOLGA8MH3BSY2 632 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 BANF1O75531 89 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 OAS1P00973 400 aaKnown RBP20.06■□□□□ 0.8
NECAB3-202ENST00000375238 ARPP19P56211 112 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 GPX6P59796 221 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 PITX1P78337 314 aaPredicted RBP20.06■□□□□ 0.8
NECAB3-202ENST00000375238 DEFB103AP81534 67 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 MMRN1Q13201 1228 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 TMED2Q15363 201 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 RTP2Q5QGT7 225 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 SPOUT1Q5T280 376 aaKnown RBP20.06■□□□□ 0.8
NECAB3-202ENST00000375238 FBXW10Q5XX13 1052 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 TRABD2AQ86V40 505 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 MAP7D3Q8IWC1 876 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 CNPY4Q8N129 248 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 RSAD2Q8WXG1 361 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 NPY6RQ99463 290 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 PHACTR1Q9C0D0 580 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 CWH43Q9H720 699 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 COX16Q9P0S2 106 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 SAMD15Q9P1V8 674 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 ZMYND8Q9ULU4 1186 aaPredicted RBP20.06■□□□□ 0.8
NECAB3-202ENST00000375238 PCDHB5Q9Y5E4 795 aa20.06■□□□□ 0.8
NECAB3-202ENST00000375238 COL4A6Q14031 1691 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 RASA4BC9J798 803 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 M0QYT0 321 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 MDM4O15151 490 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 RASA4O43374 803 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 FYNP06241 537 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 ACRP10323 421 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 CPB1P15086 417 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 EIF3EP60228 445 aaKnown RBP20.05■□□□□ 0.8
NECAB3-202ENST00000375238 IFRD2Q12894 506 aaPredicted RBP20.05■□□□□ 0.8
NECAB3-202ENST00000375238 DPYSL3Q14195 570 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 PDK2Q15119 407 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 HIF1AQ16665 826 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 MSS51Q4VC12 460 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 FNBP1LQ5T0N5 605 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 TAS1R1Q7RTX1 841 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 SCAMP5Q8TAC9 235 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 IRGQQ8WZA9 623 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 FUBP3Q96I24 572 aaKnown RBP eCLIP20.05■□□□□ 0.8
NECAB3-202ENST00000375238 TTPALQ9BTX7 342 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 MAK16Q9BXY0 300 aaKnown RBP20.05■□□□□ 0.8
NECAB3-202ENST00000375238 NSRP1Q9H0G5 558 aaKnown RBP20.05■□□□□ 0.8
NECAB3-202ENST00000375238 VPS37BQ9H9H4 285 aa20.05■□□□□ 0.8
NECAB3-202ENST00000375238 CLUHO75153 1309 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 H7C4K7 107 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 SNX3O60493 162 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 NCAM1P13591 858 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 SLC5A3P53794 718 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 WDR5P61964 334 aaKnown RBP20.04■□□□□ 0.8
NECAB3-202ENST00000375238 SF3A3Q12874 501 aaKnown RBP eCLIP20.04■□□□□ 0.85e-7■■■□□ 17
NECAB3-202ENST00000375238 NR1H3Q13133 447 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 CA9Q16790 459 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 OTUD1Q5VV17 481 aaPredicted RBP20.04■□□□□ 0.8
NECAB3-202ENST00000375238 PM20D1Q6GTS8 502 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 BHLHA9Q7RTU4 235 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 FAM131BQ86XD5 332 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 ANKS4BQ8N8V4 417 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 FAM71DQ8N9W8 422 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 NT5C3BQ969T7 300 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 WDR83Q9BRX9 315 aaKnown RBP20.04■□□□□ 0.8
NECAB3-202ENST00000375238 TCRBV7S3A2A0A539 114 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 E7ESA3 106 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 POC1B-GALNT4F8VUJ3 575 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 EFCAB14O75071 495 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 RBP3P10745 1247 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 RDXP35241 583 aaKnown RBP20.04■□□□□ 0.8
NECAB3-202ENST00000375238 NME3Q13232 169 aa20.04■□□□□ 0.8
NECAB3-202ENST00000375238 RASA2Q15283 850 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms