RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 UGT1A3P35503 534 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 UGT1A5P35504 534 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 CLPPQ16740 277 aaPredicted RBP21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 MBLAC2Q68D91 279 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 TMEM102Q8N9M5 508 aaPredicted RBP21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 MASTLQ96GX5 879 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 CDRT15Q96T59 188 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 RTKNQ9BST9 563 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 GPRC5CQ9NQ84 441 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 VPS45Q9NRW7 570 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 SMCHD1A6NHR9 2005 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 PRSS51A0A1B0GVH4 220 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 NOP56O00567 594 aaKnown RBP21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 PSMD10O75832 226 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 KCNA4P22459 653 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 CRHR1P34998 444 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 PEX3P56589 373 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 NOMO3P69849 1222 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 DEPDC1Q5TB30 811 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 MROH9Q5TGP6 573 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 SV2AQ7L0J3 742 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 NLGN1Q8N2Q7 840 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 RNF148Q8N7C7 305 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 ATP2A3Q93084 1043 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 TDRD3Q9H7E2 651 aaKnown RBP21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 MAN1C1Q9NR34 630 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 MKS1Q9NXB0 559 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 KCND2Q9NZV8 630 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 GIT1Q9Y2X7 761 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 SCINQ9Y6U3 715 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 CFBP00751 764 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 FGF3P11487 239 aaPredicted RBP21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 MGAT5BQ3V5L5 792 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 EGFLAMQ63HQ2 1017 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 NEPROQ6NW34 567 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 TRIM72Q6ZMU5 477 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 ZNF677Q86XU0 584 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 STARD8Q92502 1023 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 RMND5BQ96G75 393 aaPredicted RBP21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 HIPK3Q9H422 1215 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 HOMER2Q9NSB8 354 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 DNAJC28Q9NX36 388 aa21.18■□□□□ 0.98
TMEFF1-201ENST00000374879 J3QRK9 145 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 RNASEH2AO75792 299 aaKnown RBP21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 BAIAP3O94812 1187 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 INHBBP09529 407 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 P4HA1P13674 534 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 NUDT2P50583 147 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 TUBA4AP68366 448 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 KLF10Q13118 480 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 DPYSL3Q14195 570 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 CCDC153Q494R4 210 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 LGSNQ5TDP6 509 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 METTL21CQ5VZV1 264 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 CARM1Q86X55 608 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 TMEM174Q8WUU8 243 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 EME1Q96AY2 570 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 FBXL8Q96CD0 374 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 TMEM79Q9BSE2 394 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 PARVAQ9NVD7 372 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 CDH7Q9ULB5 785 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 RBMX2Q9Y388 322 aaKnown RBP21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 CROCCQ5TZA2 2017 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 HMX2A2RU54 273 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 ZNF195O14628 629 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 CST8O60676 142 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 CD247P20963 164 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 GABRB3P28472 473 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 PKNOX1P55347 436 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 KCNC4Q03721 635 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 CYP2A13Q16696 494 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 KRT80Q6KB66 452 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 PADI6Q6TGC4 694 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 KLHL32Q96NJ5 620 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 LENG8Q96PV6 779 aaPredicted RBP21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 TPK1Q9H3S4 243 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 COQ10BQ9H8M1 238 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 TRPV5Q9NQA5 729 aa21.17■□□□□ 0.98
TMEFF1-201ENST00000374879 ZNF536O15090 1300 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 GOLGA8TH3BQL2 631 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 PLOD2O00469 737 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 BMP10O95393 424 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 PTPN7P35236 360 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 PRELPP51888 382 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 OGDHQ02218 1023 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 GCNT1Q02742 428 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 SGF29Q96ES7 293 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 SORT1Q99523 831 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 SERPINI1Q99574 410 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 SEMA6AQ9H2E6 1030 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 PRDM16Q9HAZ2 1276 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 PNPLA8Q9NP80 782 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 AGTPBP1Q9UPW5 1226 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 AFG3L2Q9Y4W6 797 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 TMEM191CA6NGB0 347 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 CNOT3O75175 753 aaKnown RBP21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 SULT1C4O75897 302 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 TMEM191BP0C7N4 346 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 ARRB2P32121 409 aa21.16■□□□□ 0.98
TMEFF1-201ENST00000374879 UBXN2AP68543 259 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms