RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ATP6V1G2O95670 118 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 NEFHP12036 1026 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 BDNFP23560 247 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 FCGRTP55899 365 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 FAAP100Q0VG06 881 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 OLIG2Q13516 323 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 BMPR2Q13873 1038 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 SLC45A4Q5BKX6 768 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 FAM35AQ86V20 835 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 RNF139Q8WU17 664 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 TMEM209Q96SK2 561 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 ADAM2Q99965 735 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 SENP6Q9GZR1 1112 aaPredicted RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 DNAI2Q9GZS0 605 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 FAM124BQ9H5Z6 455 aaPredicted RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 NOD2Q9HC29 1040 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 ARHGEF4Q9NR80 690 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 DDIT4Q9NX09 232 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 CXorf49A8MYA2 514 aaPredicted RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 VAV1P15498 845 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 SESN2P58004 480 aaPredicted RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 SPARCL1Q14515 664 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 BZW1Q7L1Q6 419 aaKnown RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 CAND1Q86VP6 1230 aaKnown RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 CDKL3Q8IVW4 592 aaPredicted RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 HACE1Q8IYU2 909 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 CCDC63Q8NA47 563 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 AGAP3Q96P47 875 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 CYTH2Q99418 400 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 C11orf84Q9BUA3 381 aaPredicted RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 IL1RAPL1Q9NZN1 696 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 SLC17A7Q9P2U7 560 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 Q9Y3F1 56 aa18.89■□□□□ 0.61
RXRB-202ENST00000374685 USP15Q9Y4E8 981 aaPredicted RBP18.89■□□□□ 0.61
RXRB-202ENST00000374685 ITGB1P05556 798 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 PRKAR2AP13861 404 aaKnown RBP18.88■□□□□ 0.61
RXRB-202ENST00000374685 TAC1P20366 129 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 LRPAP1P30533 357 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 KLHL38Q2WGJ6 581 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 OTUD1Q5VV17 481 aaPredicted RBP18.88■□□□□ 0.61
RXRB-202ENST00000374685 SPATA21Q7Z572 469 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 UNC5BQ8IZJ1 945 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 NSMCE1Q8WV22 266 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 CENPIQ92674 756 aaPredicted RBP18.88■□□□□ 0.61
RXRB-202ENST00000374685 ANLNQ9NQW6 1124 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 SLC38A7Q9NVC3 462 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 SLC17A6Q9P2U8 582 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 NUDT5Q9UKK9 219 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 NDC80O14777 642 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 MYCP01106 439 aaPredicted RBP18.88■□□□□ 0.61
RXRB-202ENST00000374685 MT-ND3P03897 115 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 GJA9P57773 515 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 ELF3P78545 371 aaPredicted RBP18.88■□□□□ 0.61
RXRB-202ENST00000374685 CCT6BQ92526 530 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 RNF34Q969K3 372 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 CCDC134Q9H6E4 229 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 SLC24A2Q9UI40 661 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 ZMYND8Q9ULU4 1186 aaPredicted RBP18.88■□□□□ 0.61
RXRB-202ENST00000374685 FZD10Q9ULW2 581 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 TEX264Q9Y6I9 313 aa18.88■□□□□ 0.61
RXRB-202ENST00000374685 E7ESA3 106 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 CHADO15335 359 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 TRMT10BQ6PF06 316 aaKnown RBP18.87■□□□□ 0.61
RXRB-202ENST00000374685 TRPM8Q7Z2W7 1104 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 ZMIZ2Q8NF64 920 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 TCP10LQ8TDR4 215 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 DCAKDQ8WVC6 231 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 TFB1MQ8WVM0 346 aaKnown RBP18.87■□□□□ 0.61
RXRB-202ENST00000374685 MAGEB18Q96M61 343 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.87■□□□□ 0.61
RXRB-202ENST00000374685 CPSF2Q9P2I0 782 aaKnown RBP18.87■□□□□ 0.61
RXRB-202ENST00000374685 STAP1Q9ULZ2 295 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 RALGAPA2Q2PPJ7 1873 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 BCLAF3A2AJT9 711 aaKnown RBP18.87■□□□□ 0.61
RXRB-202ENST00000374685 NOS2P35228 1153 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 CAPRIN2Q6IMN6 1127 aaKnown RBP18.87■□□□□ 0.61
RXRB-202ENST00000374685 SERINC5Q86VE9 423 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 PDCD7Q8N8D1 485 aaKnown RBP18.87■□□□□ 0.61
RXRB-202ENST00000374685 LRRC8CQ8TDW0 803 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 HTR3CQ8WXA8 447 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 POPDC2Q9HBU9 364 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 TTC3P53804 2025 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 EEF2KO00418 725 aaKnown RBP18.87■□□□□ 0.61
RXRB-202ENST00000374685 USP12O75317 370 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 ASMTLO95671 621 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 F7P08709 466 aaPredicted RBP18.87■□□□□ 0.61
RXRB-202ENST00000374685 RPS6KA3P51812 740 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 OVGP1Q12889 678 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 CGB2Q6NT52 195 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 STRADAQ7RTN6 431 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 MYLPFQ96A32 169 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 RMDN2Q96LZ7 410 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 C15orf41Q9Y2V0 281 aa18.87■□□□□ 0.61
RXRB-202ENST00000374685 FAM155AB1AL88 458 aaPredicted RBP18.86■□□□□ 0.61
RXRB-202ENST00000374685 GABRDO14764 452 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 GPR182O15218 404 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 SMNDC1O75940 238 aaKnown RBP eCLIP18.86■□□□□ 0.61
RXRB-202ENST00000374685 SUN1O94901 812 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 UBOX5O94941 541 aa18.86■□□□□ 0.61
RXRB-202ENST00000374685 FYNP06241 537 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms