RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FAM163BP0C2L3 166 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 BGNP21810 368 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 NRLP54845 237 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 ZBTB16Q05516 673 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 STXBP5Q5T5C0 1151 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 HEATR6Q6AI08 1181 aaKnown RBP14.4□□□□□ -0.1
HMGCL-203ENST00000374490 UNC5AQ6ZN44 842 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 NECAB2Q7Z6G3 386 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 PRPF39Q86UA1 669 aaKnown RBP14.4□□□□□ -0.1
HMGCL-203ENST00000374490 SCUBE3Q8IX30 993 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 RFWD2Q8NHY2 731 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 CCDC110Q8TBZ0 833 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 N4BP2L2Q92802 583 aaPredicted RBP14.4□□□□□ -0.1
HMGCL-203ENST00000374490 SKA1Q96BD8 255 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 NSL1Q96IY1 281 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 CSPG4P5Q96PW8 444 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 TMEM120AQ9BXJ8 343 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 CRISPLD2Q9H0B8 497 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.4□□□□□ -0.1
HMGCL-203ENST00000374490 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 BATF3Q9NR55 127 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 GDAP2Q9NXN4 497 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 KCNK4Q9NYG8 393 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 KANSL3Q9P2N6 904 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 HEY2Q9UBP5 337 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 Q9Y3F1 56 aa14.4□□□□□ -0.1
HMGCL-203ENST00000374490 A0A0G2JND7 137 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 A0A1W2PPC1 479 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 AVILO75366 819 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 DGKIO75912 1065 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 CBX6O95503 412 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 AKR1A1P14550 325 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 CALB2P22676 271 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 HOXA11P31270 313 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-203ENST00000374490 OVGP1Q12889 678 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 SOWAHAQ2M3V2 549 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 CTC1Q2NKJ3 1217 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 SV2CQ496J9 727 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 FBXO47Q5MNV8 452 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 FAXCQ5TGI0 409 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 ANKRD20A3Q5VUR7 823 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 MFSD14CQ5VZR4 134 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 STEAP4Q687X5 459 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 ALKAL1Q6UXT8 129 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 ENDOVQ8N8Q3 282 aaKnown RBP14.39□□□□□ -0.11
HMGCL-203ENST00000374490 FAM13CQ8NE31 585 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 ACMSDQ8TDX5 336 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 NSMCE1Q8WV22 266 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 TFB1MQ8WVM0 346 aaKnown RBP14.39□□□□□ -0.11
HMGCL-203ENST00000374490 PAWRQ96IZ0 340 aaKnown RBP14.39□□□□□ -0.11
HMGCL-203ENST00000374490 TNIP3Q96KP6 325 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 SIGLEC10Q96LC7 697 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 KCTD15Q96SI1 283 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-203ENST00000374490 SIKE1Q9BRV8 207 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 NAT9Q9BTE0 207 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 PRO3102Q9H379 93 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 TUBGCP4Q9UGJ1 667 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 DCTN4Q9UJW0 460 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 L3MBTL1Q9Y468 752 aa14.39□□□□□ -0.11
HMGCL-203ENST00000374490 A0A0A0MRY4 1105 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 SMIM35A0A1B0GVV1 85 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 H3BRJ5 948 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 PIRO00625 290 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 DAB1O75553 588 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 GABBR2O75899 941 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 F2P00734 622 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 DLDP09622 509 aaKnown RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 CRHR1P34998 444 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 GNL1P36915 607 aaPredicted RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 MTM1Q13496 603 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 KIZQ2M2Z5 673 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 PLEKHG4Q58EX7 1191 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 ZNF534Q76KX8 674 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 MARK2Q7KZI7 788 aaKnown RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 ARHGAP24Q8N264 748 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 CDKL2Q92772 493 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 PTPRN2Q92932 1015 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 E2F7Q96AV8 911 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 LENG1Q96BZ8 264 aaPredicted RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 PTCD3Q96EY7 689 aaKnown RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 SPATA13Q96N96 652 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 ZMAT2Q96NC0 199 aaKnown RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 OLFM3Q96PB7 478 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 TRIM6Q9C030 488 aaPredicted RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 MMADHCQ9H3L0 296 aaPredicted RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 CXorf56Q9H5V9 222 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 HMX1Q9NP08 348 aaPredicted RBP14.38□□□□□ -0.11
HMGCL-203ENST00000374490 SIRPGQ9P1W8 387 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 NRCAMQ92823 1304 aa14.38□□□□□ -0.11
HMGCL-203ENST00000374490 PPEF2O14830 753 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 XPO1O14980 1071 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 OPHN1O60890 802 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 GPR32O75388 356 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 RFPL1O75677 317 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 PIAS1O75925 651 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 RECQL4O94761 1208 aa14.37□□□□□ -0.11
HMGCL-203ENST00000374490 LUC7L3O95232 432 aaKnown RBP14.37□□□□□ -0.11
HMGCL-203ENST00000374490 METTL18O95568 372 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms