RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 CASP8Q14790 479 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 MAP9Q49MG5 647 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 FAM109BQ6ICB4 259 aaPredicted RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 RFX8Q6ZV50 586 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 SND1Q7KZF4 910 aaKnown RBP eCLIP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 UNC45BQ8IWX7 931 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 TCEAL8Q8IYN2 117 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 FBXO25Q8TCJ0 367 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 P3H4Q92791 437 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 FCRL2Q96LA5 508 aaPredicted RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 MYRFLQ96LU7 910 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 UBE2OQ9C0C9 1292 aaKnown RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 USP29Q9HBJ7 922 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 ALG13Q9NP73 1137 aaKnown RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 CREB3O43889 395 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 GAS8O95995 478 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 RBP3P10745 1247 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 ARL4AP40617 200 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 HCAR3P49019 387 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 PSEN1P49768 467 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 HLTFQ14527 1009 aaKnown RBP eCLIP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 PPP2R5DQ14738 602 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 BRMS1LQ5PSV4 323 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 FAM182AQ5T1J6 154 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 SNX30Q5VWJ9 437 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 RHBDF2Q6PJF5 856 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 ZC3H18Q86VM9 953 aaKnown RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 TSEN2Q8NCE0 465 aaKnown RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 LRRN4Q8WUT4 740 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 ART4Q93070 314 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 OLFM3Q96PB7 478 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 OSBPL2Q9H1P3 480 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 CCSER2Q9H7U1 834 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 TLR8Q9NR97 1041 aaKnown RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 FAM53CQ9NYF3 392 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 DTLQ9NZJ0 730 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 WHRNQ9P202 907 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 MAGED2Q9UNF1 606 aaPredicted RBP16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 HEY1Q9Y5J3 304 aa16.25■□□□□ 0.19
NIPAL3-204ENST00000374399 OBSL1O75147 1896 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 GRXCR1A8MXD5 290 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 H3BRJ5 948 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 EEF2KO00418 725 aaKnown RBP16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 ATP8B1O43520 1251 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 PAGE1O75459 146 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 LRIG2O94898 1065 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 PLTPP55058 493 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 EFEMP1Q12805 493 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 NNTQ13423 1086 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 ARL13BQ3SXY8 428 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 MANEALQ5VSG8 457 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 LILRA6Q6PI73 481 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 TP53INP2Q8IXH6 220 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 ZNF276Q8N554 614 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 SERPINB11Q96P15 392 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 C17orf80Q9BSJ5 609 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 TXLNGYQ9BZA5 131 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 ADAM7Q9H2U9 754 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 STK39Q9UEW8 545 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 OR12D3Q9UGF7 316 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 TLR6Q9Y2C9 796 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 INSL5Q9Y5Q6 135 aa16.24■□□□□ 0.19
NIPAL3-204ENST00000374399 NUP205Q92621 2012 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 ZNF840PA6NDX5 716 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 MCF2LO15068 1137 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 TGM5O43548 720 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 MFSD11O43934 449 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 IGLV3-27P01718 113 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 SPATA31D3P0C874 917 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 CCR1P32246 355 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 VPS41P49754 854 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 LMNB2Q03252 620 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 CAMK1Q14012 370 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 PAFAH1B3Q15102 231 aaKnown RBP16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 SPATA31D4Q6ZUB0 917 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 TMEM150AQ86TG1 271 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 NETO2Q8NC67 525 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 SPPL3Q8TCT6 385 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 KLHL5Q96PQ7 755 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 HAPLN3Q96S86 360 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 PCDH9Q9HC56 1237 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 ASIC3Q9UHC3 531 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 IRAK3Q9Y616 596 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 LAMA3Q16787 3333 aa16.23■□□□□ 0.19
NIPAL3-204ENST00000374399 HIDE1A8MVS5 230 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 CXCL14O95715 111 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 CSH1P0DML2 217 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 CSH2P0DML3 217 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 ZFXP17010 805 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 ERCC2P18074 760 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 CTNNB1P35222 781 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 NR2C2P49116 596 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 TWF1Q12792 350 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 GSTA5Q7RTV2 222 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 HDXQ7Z353 690 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 ZNF683Q8IZ20 524 aa16.22■□□□□ 0.19
NIPAL3-204ENST00000374399 MREGQ8N565 214 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms