RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 DERAQ9Y315 318 aa11.77□□□□□ -0.53
PTPN20-204ENST00000374346 MCM3APO60318 1980 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 HMX2A2RU54 273 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 ASB14A6NK59 587 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 PRR5-ARHGAP8B1AHC4 643 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 KIF3CO14782 793 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 MYL4P12829 197 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 AMPD1P23109 780 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 SLC1A6P48664 564 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 PSEN1P49768 467 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 CCNHP51946 323 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 ARHGAP8P85298 464 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 DSG1Q02413 1049 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 LAMC2Q13753 1193 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 DCAF4L1Q3SXM0 396 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 MDH1BQ5I0G3 518 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 STEAP4Q687X5 459 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 LRRC8BQ6P9F7 803 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 DENND5BQ6ZUT9 1274 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 SLC26A9Q7LBE3 791 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 ADGRF2Q8IZF7 708 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 COPS5Q92905 334 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 ZBTB10Q96DT7 871 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 CSPG4P5Q96PW8 444 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 PPP1R16BQ96T49 567 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 VCX3BQ9H321 246 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 RCOR3Q9P2K3 495 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 GTF2IRD1Q9UHL9 959 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 PLA2G4CQ9UP65 541 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 COL1A2P08123 1366 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 POLR2AP24928 1970 aaKnown RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 WDR27A2RRH5 827 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 OPHN1O60890 802 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 ANPEPP15144 967 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 PGAM1P18669 254 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 GRM5P41594 1212 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 ACADSBP45954 432 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 BCAT1P54687 386 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 BST2Q10589 180 aaKnown RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 INSCQ1MX18 579 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 N4BP2L1Q5TBK1 243 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 AAGABQ6PD74 315 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 TMEM130Q8N3G9 435 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 OR6B3Q8NGW1 331 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 SREK1Q8WXA9 508 aaKnown RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 CENPIQ92674 756 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 KHSRPQ92945 711 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 CLMNQ96JQ2 1002 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 NR1H4Q96RI1 486 aaPredicted RBP11.76□□□□□ -0.53
PTPN20-204ENST00000374346 SYT15Q9BQS2 421 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 APOL6Q9BWW8 343 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
PTPN20-204ENST00000374346 DNAJC25-GNG10A0A024R161 153 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 A0A0G2JLL6 359 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 ARHGAP42A6NI28 874 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 VTNP04004 478 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 SERPINE1P05121 402 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 MX2P20592 715 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 SP100P23497 879 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 BAG6P46379 1132 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 IRX4P78413 519 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 SLC10A2Q12908 348 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 HSF5Q4G112 596 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 MBLAC2Q68D91 279 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 ZCCHC23Q6ZST2 131 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 RFX8Q6ZV50 586 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 STRADAQ7RTN6 431 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 PRRT2Q7Z6L0 340 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 MYLK4Q86YV6 388 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 C7orf31Q8N865 590 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 CMTM5Q96DZ9 223 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 PANX3Q96QZ0 392 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 MRPL45Q9BRJ2 306 aaKnown RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 MROH8Q9H579 483 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 DTLQ9NZJ0 730 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 PDP2Q9P2J9 529 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 SLC7A8Q9UHI5 535 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 DNAJC16Q9Y2G8 782 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 MYO18AQ92614 2054 aaKnown RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 PLXNA1Q9UIW2 1896 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 DCAF8L1A6NGE4 600 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 TPP1O14773 563 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 IRF6O14896 467 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 AHCYL1O43865 530 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 TSPAN1O60635 241 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 LGALS2P05162 132 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 POLBP06746 335 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 FESP07332 822 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 COPAP53621 1224 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 EFHC1Q5JVL4 640 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 PACS1Q6VY07 963 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 PSTKQ8IV42 348 aaKnown RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 LRRC52Q8N7C0 313 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 ANKRD52Q8NB46 1076 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 COLGALT1Q8NBJ5 622 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 BEST2Q8NFU1 509 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 LRRN4Q8WUT4 740 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 FGD4Q96M96 766 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms