RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TFDP3Q5H9I0 405 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 KRT39Q6A163 491 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 LYSMD3Q7Z3D4 306 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 CLEC10AQ8IUN9 316 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 C12orf56Q8IXR9 622 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 BHLHE22Q8NFJ8 381 aaPredicted RBP13.29□□□□□ -0.28
PRPF4-201ENST00000374198 TMEM174Q8WUU8 243 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 DLG3Q92796 817 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 FAM96AQ9H5X1 160 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 NMRK2Q9NPI5 230 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 RBMX2Q9Y388 322 aaKnown RBP13.29□□□□□ -0.28
PRPF4-201ENST00000374198 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 KRBA1A5PL33 1030 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 H3BMQ9 156 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 J3QRK9 145 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 K7ENM7 598 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 GIPC1O14908 333 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 C1QAP02745 245 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
PRPF4-201ENST00000374198 TKTP29401 623 aaKnown RBP13.29□□□□□ -0.28
PRPF4-201ENST00000374198 PTPN7P35236 360 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 GSSP48637 474 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 PSMC5P62195 406 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 MBLAC2Q68D91 279 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 C16orf46Q6P387 395 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 FIBCD1Q8N539 461 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 FBXL8Q96CD0 374 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 COG8Q96MW5 612 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 OLFM1Q99784 485 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 TMEM206Q9H813 350 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 PNPLA8Q9NP80 782 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 COQ4Q9Y3A0 265 aa13.29□□□□□ -0.28
PRPF4-201ENST00000374198 A0A1W2PPW3 197 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 GLTPD2A6NH11 291 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 CXorf49A8MYA2 514 aaPredicted RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 PFDN6O15212 129 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 EIF2S1P05198 315 aaKnown RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 HOXD11P31277 338 aaPredicted RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 DSG3P32926 999 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 BMPR2Q13873 1038 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 KCNJ8Q15842 424 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 AOC3Q16853 763 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 EEPD1Q7L9B9 569 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 SETD3Q86TU7 594 aaPredicted RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 TXNRD3Q86VQ6 643 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 RSAD2Q8WXG1 361 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 PNPOQ9NVS9 261 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 SAE1Q9UBE0 346 aaPredicted RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 IP6K2Q9UHH9 426 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 NUB1Q9Y5A7 615 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 A0A087WXM4 84 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 TRIM64CA6NLI5 447 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 CFAP99D6REC4 459 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 RNASEH2AO75792 299 aaKnown RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 ADRB2P07550 413 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 CD247P20963 164 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 CDKN2BP42772 138 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 MS4A2Q01362 244 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 KLF10Q13118 480 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 DPYSQ14117 519 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 GRIK5Q16478 980 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 PIGGQ5H8A4 983 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 FSCBQ5H9T9 825 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 GPATCH4Q5T3I0 446 aaKnown RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 VWA5B1Q5TIE3 1220 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 IL23RQ5VWK5 629 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 KCTD1Q719H9 257 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 ZNF677Q86XU0 584 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 UBR7Q8N806 425 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 ZNF420Q8TAQ5 688 aaPredicted RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 FEZF2Q8TBJ5 459 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 TRUB1Q8WWH5 349 aaKnown RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 TAMM41Q96BW9 452 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 CCDC138Q96M89 665 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 CDRT15Q96T59 188 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 DOK1Q99704 481 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 TDRD1Q9BXT4 1180 aaKnown RBP13.28□□□□□ -0.28
PRPF4-201ENST00000374198 COQ10BQ9H8M1 238 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 RRAGCQ9HB90 399 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 KCND2Q9NZV8 630 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 B3GNT3Q9Y2A9 372 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 TTLL3Q9Y4R7 772 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 CORINQ9Y5Q5 1042 aa13.28□□□□□ -0.28
PRPF4-201ENST00000374198 NOP56O00567 594 aaKnown RBP13.27□□□□□ -0.28
PRPF4-201ENST00000374198 AIM2O14862 343 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 ZBTB14O43829 449 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 DGKIO75912 1065 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 NUDT2P50583 147 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 BASP1P80723 227 aaKnown RBP13.27□□□□□ -0.28
PRPF4-201ENST00000374198 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.28
PRPF4-201ENST00000374198 BNIP3Q12983 259 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 IKBKEQ14164 716 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.28
PRPF4-201ENST00000374198 FGD3Q5JSP0 725 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms