RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 PCDHB7Q9Y5E2 793 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 LRRD1A4D1F6 860 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 C2CD2LO14523 706 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 AP1G2O75843 785 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 RNF8O76064 485 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 ETS1P14921 441 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 IL1R2P27930 398 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 PCSK1P29120 753 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 ZNF143P52747 638 aaPredicted RBP13.73□□□□□ -0.21
A1CF-204ENST00000373997 ARL4CP56559 192 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 BCAR1P56945 870 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 DSC1Q08554 894 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 SLC1A5Q15758 541 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 HADHQ16836 314 aaKnown RBP13.73□□□□□ -0.21
A1CF-204ENST00000373997 KCNT1Q5JUK3 1230 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 ANKRD20A2Q5SQ80 823 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 ANKRD20A1Q5TYW2 823 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 ANKRD20A3Q5VUR7 823 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 CLEC20AQ6ZU45 233 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 CTU1Q7Z7A3 348 aaKnown RBP13.73□□□□□ -0.21
A1CF-204ENST00000373997 PPIL6Q8IXY8 311 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 COLGALT2Q8IYK4 626 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 RHOBTB2Q9BYZ6 727 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 KIF9Q9HAQ2 790 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 RNPEPL1Q9HAU8 725 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 SLCO1B3Q9NPD5 702 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 SAR1AQ9NR31 198 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 ASNSD1Q9NWL6 643 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 GRID1Q9ULK0 1009 aa13.73□□□□□ -0.21
A1CF-204ENST00000373997 M0QZQ0 153 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 SGK1O00141 431 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 HGSO14964 777 aaPredicted RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 TM9SF1O15321 606 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 CYP11A1P05108 521 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 MIPP30301 263 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 ACADSBP45954 432 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 WASHC2DQ5SRD0 308 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 OVOS1Q6IE37 1185 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 CFAP61Q8NHU2 1237 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 NDRG1Q92597 394 aaKnown RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 ZNF75CPQ92670 426 aaPredicted RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 APBB2Q92870 758 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 MYLPFQ96A32 169 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 SUSD3Q96L08 255 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 TMEM209Q96SK2 561 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 CNPY3Q9BT09 278 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 DHRS4Q9BTZ2 278 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 HCSTQ9UBK5 93 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 TROVE2P10155 538 aaKnown RBP eCLIP13.72□□□□□ -0.21
A1CF-204ENST00000373997 CALB2P22676 271 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 PLCB3Q01970 1234 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 LVRNQ6Q4G3 990 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 ADGRD1Q6QNK2 874 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 OTOAQ7RTW8 1153 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 HSPH1Q92598 858 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 KHSRPQ92945 711 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■□□□□ 10.7
A1CF-204ENST00000373997 SLC7A6OSQ96CW6 309 aaPredicted RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 HSFY1Q96LI6 401 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 MAK16Q9BXY0 300 aaKnown RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 ACSS3Q9H6R3 686 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 TLE6Q9H808 572 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 NGRNQ9NPE2 291 aaKnown RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 LNPEPQ9UIQ6 1025 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 RABGEF1Q9UJ41 708 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 HAO1Q9UJM8 370 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 DSEQ9UL01 958 aa13.72□□□□□ -0.21
A1CF-204ENST00000373997 ZMYND8Q9ULU4 1186 aaPredicted RBP13.72□□□□□ -0.21
A1CF-204ENST00000373997 LTBP2Q14767 1821 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 E7ESA3 106 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 IFNB1P01574 187 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 KRT7P08729 469 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 T-ENOLP0DO92 83 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 KRT4P19013 534 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 SDC4P31431 198 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 CACNA2D1P54289 1103 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 GPX6P59796 221 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 CCDC14Q49A88 953 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 CMPK2Q5EBM0 449 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.21
A1CF-204ENST00000373997 FBXO46Q6PJ61 603 aaPredicted RBP13.71□□□□□ -0.21
A1CF-204ENST00000373997 OR10T2Q8NGX3 314 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 PEBP4Q96S96 227 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 SMOQ99835 787 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 TMEM121Q9BTD3 319 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 TUBB6Q9BUF5 446 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 VPS11Q9H270 941 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
A1CF-204ENST00000373997 LRRC4Q9HBW1 653 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 TMEM30AQ9NV96 361 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
A1CF-204ENST00000373997 CLUHO75153 1309 aa13.71□□□□□ -0.22
A1CF-204ENST00000373997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
A1CF-204ENST00000373997 A0A1W2PPM1 405 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms