RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 HSF2BPO75031 334 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 RPP40O75818 363 aaKnown RBP16.6■□□□□ 0.25
HDAC8-208ENST00000373583 LSM8O95777 96 aaKnown RBP16.6■□□□□ 0.25
HDAC8-208ENST00000373583 HNRNPLP14866 589 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC8-208ENST00000373583 PXNP49023 591 aaPredicted RBP16.6■□□□□ 0.25
HDAC8-208ENST00000373583 KLK7P49862 253 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 SRSF5Q13243 272 aaKnown RBP16.6■□□□□ 0.25
HDAC8-208ENST00000373583 SYCP1Q15431 976 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 FAM133BQ5BKY9 247 aaKnown RBP16.6■□□□□ 0.25
HDAC8-208ENST00000373583 EFHC1Q5JVL4 640 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 MPP7Q5T2T1 576 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 SYPL2Q5VXT5 272 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 TMEM92Q6UXU6 159 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 PRR23BQ6ZRT6 265 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 FAM183BPQ6ZVS7 135 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 SLC26A9Q7LBE3 791 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 ZNF677Q86XU0 584 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 ZDHHC17Q8IUH5 632 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 TMEM35BQ8NCS4 154 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 DDI1Q8WTU0 396 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 GMEB2Q9UKD1 530 aa16.6■□□□□ 0.25
HDAC8-208ENST00000373583 TNRC6BQ9UPQ9 1833 aaKnown RBP16.6■□□□□ 0.25
HDAC8-208ENST00000373583 NYNRINQ9P2P1 1898 aaKnown RBP16.59■□□□□ 0.25
HDAC8-208ENST00000373583 CEP192Q8TEP8 1941 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 THADAQ6YHU6 1953 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 NUP205Q92621 2012 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 EPHB6O15197 1021 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 ACSL4O60488 711 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 ALDH1A2O94788 518 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 ERBB2P04626 1255 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 PTMSP20962 102 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 NTSR1P30989 418 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 SCNN1AP37088 669 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 GABRB2P47870 512 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 POLR2FP61218 127 aaKnown RBP16.59■□□□□ 0.25
HDAC8-208ENST00000373583 EIF4EBP2Q13542 120 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-208ENST00000373583 EIF4HQ15056 248 aaKnown RBP16.59■□□□□ 0.25
HDAC8-208ENST00000373583 EGFLAMQ63HQ2 1017 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 CEP68Q76N32 757 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 ANKS1BQ7Z6G8 1248 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 NOP9Q86U38 636 aaKnown RBP16.59■□□□□ 0.25
HDAC8-208ENST00000373583 ZNF397Q8NF99 534 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-208ENST00000373583 MDGA1Q8NFP4 955 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 GABRG3Q99928 467 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 DDX50Q9BQ39 737 aaKnown RBP16.59■□□□□ 0.25
HDAC8-208ENST00000373583 HINFPQ9BQA5 517 aa16.59■□□□□ 0.25
HDAC8-208ENST00000373583 POLMQ9NP87 494 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-208ENST00000373583 DMXL1Q9Y485 3027 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 NPC1O15118 1278 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 LRP3O75074 770 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 DAB1O75553 588 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 TRUB2O95900 331 aaKnown RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 ATP1A3P13637 1013 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 CDK11BP21127 795 aaKnown RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 SOX5P35711 763 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 UBXN1Q04323 297 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 E2F5Q15329 346 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 TAF5Q15542 800 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 GEN1Q17RS7 908 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 PIK3R6Q5UE93 754 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 ANO7Q6IWH7 933 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 CACNA2D4Q7Z3S7 1137 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 GPR161Q8N6U8 529 aaKnown RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 ZNF557Q8N988 423 aaPredicted RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 NEK11Q8NG66 645 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 TMA16Q96EY4 203 aaKnown RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 ZC3H10Q96K80 434 aaKnown RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 PDCL3Q9H2J4 239 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 SYNCQ9H7C4 482 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 ZDHHC4Q9NPG8 344 aa16.58■□□□□ 0.24
HDAC8-208ENST00000373583 NOCTQ9UK39 431 aaKnown RBP16.58■□□□□ 0.24
HDAC8-208ENST00000373583 SMTNL1A8MU46 457 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 TSPAN3O60637 253 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 GFPT2O94808 682 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 APOEP02649 317 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 RETP07949 1114 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 HOXB2P14652 356 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 SLC6A4P31645 630 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 ZNF165P49910 485 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 NOMO3P69849 1222 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 CDK17Q00537 523 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 SLC6A3Q01959 620 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 ENPP2Q13822 863 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 DCAF6Q58WW2 860 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 NADSYN1Q6IA69 706 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 OR6B2Q6IFH4 312 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 C11orf74Q86VG3 221 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 CHPFQ8IZ52 775 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 DEFB106AQ8N104 65 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 FAM160A2Q8N612 972 aaPredicted RBP16.57■□□□□ 0.24
HDAC8-208ENST00000373583 HJURPQ8NCD3 748 aaPredicted RBP16.57■□□□□ 0.24
HDAC8-208ENST00000373583 MSANTD4Q8NCY6 345 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 OLIG1Q8TAK6 271 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 ADAM32Q8TC27 787 aa16.57■□□□□ 0.24
HDAC8-208ENST00000373583 WFIKKN2Q8TEU8 576 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms