RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 NANOGNBQ7Z5D8 188 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 ZDHHC17Q8IUH5 632 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 SLC22A9Q8IVM8 553 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 CYP2W1Q8TAV3 490 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 RMND5BQ96G75 393 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-202ENST00000373474 TMEM237Q96Q45 408 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 PRDM5Q9NQX1 630 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-202ENST00000373474 ACOT9Q9Y305 439 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 C1orf232A0A0U1RR37 186 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 FCHO1O14526 889 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 VTNP04004 478 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 PGK2P07205 417 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 DPEP1P16444 411 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 ELF3P78545 371 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-202ENST00000373474 C11orf88Q6PI97 169 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 WDR59Q6PJI9 974 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 ZBTB49Q6ZSB9 765 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 TMEM79Q9BSE2 394 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 BARX2Q9UMQ3 279 aaPredicted RBP14.56□□□□□ -0.08
LMX1B-202ENST00000373474 LINC00854A0A1B0GVQ3 168 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 MMRN1Q13201 1228 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 IL17AQ16552 155 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 DEFB107AQ8IZN7 70 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 TTC30BQ8N4P2 665 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 TBCBQ99426 244 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 RMND5AQ9H871 391 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 ZFYVE1Q9HBF4 777 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 DKK3Q9UBP4 350 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 KBTBD13C9JR72 458 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 PHGDHO43175 533 aaKnown RBP14.56□□□□□ -0.08
LMX1B-202ENST00000373474 ASMTLO95671 621 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 CYP1A2P05177 515 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 CXCL8P10145 99 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 MLNP12872 115 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 ACO1P21399 889 aaKnown RBP14.56□□□□□ -0.08
LMX1B-202ENST00000373474 PAX7P23759 505 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 PRKAA2P54646 552 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 CDK16Q00536 496 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 NAB1Q13506 487 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 NFYCQ13952 458 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 KRT78Q8N1N4 520 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 CPNE1Q99829 537 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 C1orf50Q9BV19 199 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 THUMPD3Q9BV44 507 aaKnown RBP14.56□□□□□ -0.08
LMX1B-202ENST00000373474 PIGUQ9H490 435 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 NCKIPSDQ9NZQ3 722 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 VTI1BQ9UEU0 232 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 DNPEPQ9ULA0 475 aa14.56□□□□□ -0.08
LMX1B-202ENST00000373474 WDR27A2RRH5 827 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 AHCYL1O43865 530 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 VPS26AO75436 327 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 NR2C2P49116 596 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 CCT3P49368 545 aaKnown RBP14.55□□□□□ -0.08
LMX1B-202ENST00000373474 ANXA11P50995 505 aaKnown RBP14.55□□□□□ -0.08
LMX1B-202ENST00000373474 EPS8Q12929 822 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
LMX1B-202ENST00000373474 USP39Q53GS9 565 aaKnown RBP14.55□□□□□ -0.08
LMX1B-202ENST00000373474 ANKRD13AQ8IZ07 590 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 VPS33AQ96AX1 596 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 REXO4Q9GZR2 422 aaKnown RBP14.55□□□□□ -0.08
LMX1B-202ENST00000373474 HDHD2Q9H0R4 259 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 CRLS1Q9UJA2 301 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 KCNH4Q9UQ05 1017 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 ANKRD6Q9Y2G4 727 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 NR5A2O00482 541 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 RGS2P41220 211 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 MMP14P50281 582 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 KLHL17Q6TDP4 642 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 FAM180AQ6UWF9 173 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 MAP4K3Q8IVH8 894 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 KYQ8NBH2 561 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 SRPK1Q96SB4 655 aaKnown RBP14.55□□□□□ -0.08
LMX1B-202ENST00000373474 GANQ9H2C0 597 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 CYP4F12Q9HCS2 524 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 ABI2Q9NYB9 513 aaPredicted RBP14.55□□□□□ -0.08
LMX1B-202ENST00000373474 RIMS1Q86UR5 1692 aaKnown RBP14.55□□□□□ -0.08
LMX1B-202ENST00000373474 PIPSLA2A3N6 862 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 ST8SIA6P61647 398 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 GALNTL6Q49A17 601 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 MFSD7Q6UXD7 560 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 FAM131BQ86XD5 332 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 SLITRK1Q96PX8 696 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 UBXN6Q9BZV1 441 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 TBC1D13Q9NVG8 400 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 PCYOX1Q9UHG3 505 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 SH3BP1Q9Y3L3 701 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 EML1O00423 815 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 RGL2O15211 777 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 TPST1O60507 370 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 LRRC49Q8IUZ0 686 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 ZCWPW1Q9H0M4 648 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 GGA2Q9UJY4 613 aa14.55□□□□□ -0.08
LMX1B-202ENST00000373474 TTLL9Q3SXZ7 439 aa14.54□□□□□ -0.08
LMX1B-202ENST00000373474 B3GNT6Q6ZMB0 384 aa14.54□□□□□ -0.08
LMX1B-202ENST00000373474 GDPD5Q8WTR4 605 aa14.54□□□□□ -0.08
LMX1B-202ENST00000373474 USP13Q92995 863 aaPredicted RBP14.54□□□□□ -0.08
LMX1B-202ENST00000373474 KCNMB3Q9NPA1 279 aa14.54□□□□□ -0.08
LMX1B-202ENST00000373474 SCUBE2Q9NQ36 999 aa14.54□□□□□ -0.08
LMX1B-202ENST00000373474 CHST7Q9NS84 486 aa14.54□□□□□ -0.08
LMX1B-202ENST00000373474 TMCC3Q9ULS5 477 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms