RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 ERVK-10P10266 1014 aa18.3■□□□□ 0.52
VPS26A-202ENST00000373382 FGF3P11487 239 aaPredicted RBP18.3■□□□□ 0.52
VPS26A-202ENST00000373382 MLH1P40692 756 aa18.3■□□□□ 0.52
VPS26A-202ENST00000373382 LSAMPQ13449 338 aa18.3■□□□□ 0.52
VPS26A-202ENST00000373382 FAM91A1Q658Y4 838 aa18.3■□□□□ 0.52
VPS26A-202ENST00000373382 NXNQ6DKJ4 435 aa18.3■□□□□ 0.52
VPS26A-202ENST00000373382 AAGABQ6PD74 315 aa18.3■□□□□ 0.52
VPS26A-202ENST00000373382 SIGLEC10Q96LC7 697 aa18.3■□□□□ 0.52
VPS26A-202ENST00000373382 PRPF18Q99633 342 aaKnown RBP18.3■□□□□ 0.52
VPS26A-202ENST00000373382 CNPY3Q9BT09 278 aa18.3■□□□□ 0.52
VPS26A-202ENST00000373382 ATG7O95352 703 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 NFICP08651 508 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 RALBP11234 206 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 NELFEP18615 380 aaKnown RBP18.29■□□□□ 0.52
VPS26A-202ENST00000373382 TLR1Q15399 786 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 ANKRD20A4Q4UJ75 823 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 MBLAC2Q68D91 279 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 SLC4A11Q8NBS3 891 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 AKT1S1Q96B36 256 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 LRGUKQ96M69 825 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 COPS7BQ9H9Q2 264 aaPredicted RBP18.29■□□□□ 0.52
VPS26A-202ENST00000373382 XPNPEP3Q9NQH7 507 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 ALDOAP04075 364 aaKnown RBP18.29■□□□□ 0.52
VPS26A-202ENST00000373382 ZNF143P52747 638 aaPredicted RBP18.29■□□□□ 0.52
VPS26A-202ENST00000373382 INHBCP55103 352 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 OLIG2Q13516 323 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 CYTH1Q15438 398 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 MARK4Q96L34 752 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 WDR55Q9H6Y2 383 aaPredicted RBP18.29■□□□□ 0.52
VPS26A-202ENST00000373382 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 LOXHD1Q8IVV2 1947 aa18.29■□□□□ 0.52
VPS26A-202ENST00000373382 ENO3P13929 434 aaPredicted RBP18.28■□□□□ 0.52
VPS26A-202ENST00000373382 ARRB2P32121 409 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PGGT1BP53609 377 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PPM1LQ5SGD2 360 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PQLC3Q8N755 202 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 FNIP1Q8TF40 1166 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 SNRNP25Q9BV90 132 aaKnown RBP18.28■□□□□ 0.52
VPS26A-202ENST00000373382 B3GNT5Q9BYG0 378 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 C1orf21Q9H246 121 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 MFHAS1Q9Y4C4 1052 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 LTBP1Q14766 1721 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 WNT10BO00744 389 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 MAFGO15525 162 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 ADCY6O43306 1168 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PEX1O43933 1283 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 IL1BP01584 269 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 HOXC6P09630 235 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 TFE3P19532 575 aaPredicted RBP18.28■□□□□ 0.52
VPS26A-202ENST00000373382 MGAT1P26572 445 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 CDH5P33151 784 aaPredicted RBP18.28■□□□□ 0.52
VPS26A-202ENST00000373382 COG7P83436 770 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 KCNT2Q6UVM3 1135 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 ZBTB8OSQ8IWT0 167 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 TMEM176AQ96HP8 235 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 AGAP3Q96P47 875 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 EMCNQ9ULC0 261 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 LZTS1Q9Y250 596 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PLIN3O60664 434 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 AMHP03971 560 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PABPC4LP0CB38 370 aaKnown RBP18.28■□□□□ 0.52
VPS26A-202ENST00000373382 COX4I1P13073 169 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 STAT5BP51692 787 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 TUBB3Q13509 450 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 TTLL12Q14166 644 aaPredicted RBP18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PTAR1Q7Z6K3 402 aaPredicted RBP18.28■□□□□ 0.52
VPS26A-202ENST00000373382 FBXW8Q8N3Y1 598 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 CDKL2Q92772 493 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 DCUN1D1Q96GG9 259 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 CDHR1Q96JP9 859 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 LENG8Q96PV6 779 aaPredicted RBP18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PCDH18Q9HCL0 1135 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 PNPLA8Q9NP80 782 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 NRBP2Q9NSY0 501 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 RNF19AQ9NV58 838 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 ATXN10Q9UBB4 475 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 DNAJB4Q9UDY4 337 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 ARHGAP26Q9UNA1 814 aa18.28■□□□□ 0.52
VPS26A-202ENST00000373382 BIRC5O15392 142 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 MSCO60682 206 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 SERPINE1P05121 402 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 FDFT1P37268 417 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 PHKA2P46019 1235 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 GABRB2P47870 512 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 TMED1Q13445 227 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 TAZQ16635 292 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 HEATR6Q6AI08 1181 aaKnown RBP18.27■□□□□ 0.52
VPS26A-202ENST00000373382 ARCQ7LC44 396 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 TMC7Q7Z402 723 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 C7orf31Q8N865 590 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 ZNF781Q8N8C0 355 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 CCNYQ8ND76 341 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 CDRT15Q96T59 188 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 ACO2Q99798 780 aaKnown RBP18.27■□□□□ 0.52
VPS26A-202ENST00000373382 COG4Q9H9E3 785 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.52
VPS26A-202ENST00000373382 ZBTB14O43829 449 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 USP12O75317 370 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 IL4RP24394 825 aa18.27■□□□□ 0.52
VPS26A-202ENST00000373382 CYP2F1P24903 491 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms