RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 PLEKHH3Q7Z736 793 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 PPM1NQ8N819 430 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 APPL2Q8NEU8 664 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 SYN2Q92777 582 aaPredicted RBP6.77□□□□□ -1.33
CHD6-203ENST00000373233 RNF34Q969K3 372 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ERGIC2Q96RQ1 377 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 EMILIN2Q9BXX0 1053 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 DNAJC11Q9NVH1 559 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ADAMTS1Q9UHI8 967 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 ING4Q9UNL4 249 aa6.77□□□□□ -1.33
CHD6-203ENST00000373233 NEMP1O14524 444 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CPA3P15088 417 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 ZNF24P17028 368 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 TCF7P36402 384 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 CCNFP41002 786 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD6-203ENST00000373233 COX10Q12887 443 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 OVGP1Q12889 678 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 ZNF211Q13398 564 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 RRP1BQ14684 758 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 PPP1R36Q96LQ0 422 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 RBM15Q96T37 977 aaKnown RBP eCLIP6.76□□□□□ -1.332e-6■■■□□ 14.6
CHD6-203ENST00000373233 SLC8A2Q9UPR5 921 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 PNMA8CA0A1B0GUJ8 204 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CDC40O60508 579 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD6-203ENST00000373233 PRKACAP17612 351 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CD58P19256 250 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 SOX11P35716 441 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 NPTX2P47972 431 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 HIF1AQ16665 826 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 TREML2Q5T2D2 321 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 IZUMO3Q5VZ72 239 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 OTOP1Q7RTM1 612 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 SAPCD2Q86UD0 394 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 JAMLQ86YT9 394 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 THNSL1Q8IYQ7 743 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 HTRA1Q92743 480 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 TMEM120AQ9BXJ8 343 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 RRAGCQ9HB90 399 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 DOCK5Q9H7D0 1870 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 M0R2N6 131 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 TJP3O95049 919 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CNTN2Q02246 1040 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 LBRQ14739 615 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 HADHQ16836 314 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 C5orf22Q49AR2 442 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CCDC137Q6PK04 289 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 SNX32Q86XE0 403 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 MAB21L3Q8N8X9 362 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 FNIP1Q8TF40 1166 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 HSPH1Q92598 858 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 KLRG1Q96E93 195 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 SPATA16Q9BXB7 569 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 TTC7AQ9ULT0 858 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 UMODL1Q5DID0 1318 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 FER1L6Q2WGJ9 1857 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 TRIP11Q15643 1979 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 ADAMTS3O15072 1205 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 ATF6P18850 670 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 POLR2BP30876 1174 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 TTKP33981 857 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 UPF1Q92900 1129 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD6-203ENST00000373233 OXNAD1Q96HP4 312 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 ZNF668Q96K58 619 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 AGPAT5Q9NUQ2 364 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 RBAKQ9NYW8 714 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 RP1P56715 2156 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 NUP62P37198 522 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 DNAJC3Q13217 504 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 SETD3Q86TU7 594 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 ACMSDQ8TDX5 336 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 MRPL47Q9HD33 250 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 GPRC5CQ9NQ84 441 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 TRIM10Q9UDY6 481 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 TMEM247A6NEH6 219 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 PDLIM1O00151 329 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 GTF2H1P32780 548 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CDK7P50613 346 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 ARHGEF6Q15052 776 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 MAPRE1Q15691 268 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 TTMPQ5BVD1 217 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 PAPD7Q5XG87 772 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 ISLR2Q6UXK2 745 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 MMTAG2Q9BU76 263 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 STK33Q9BYT3 514 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 NXF1Q9UBU9 619 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 APEX2Q9UBZ4 518 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CHKBQ9Y259 395 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 SAGE2PA6NJ88 616 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 MAGEB2O15479 319 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 BMP10O95393 424 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 PSMB9P28065 219 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 NOL9Q5SY16 702 aaKnown RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 LRMDAQ9H2I8 198 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CDY2AQ9Y6F7 541 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 CDY1Q9Y6F8 540 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 MED7O43513 233 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 SLITRK3O94933 977 aa6.76□□□□□ -1.33
CHD6-203ENST00000373233 MYCLP1P12525 358 aaPredicted RBP6.76□□□□□ -1.33
CHD6-203ENST00000373233 PLA2G4EQ3MJ16 856 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms