RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 IL4RP24394 825 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 PMLP29590 882 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 ARL2P36404 184 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 MPP3Q13368 585 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 TFDP2Q14188 446 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 BSPRYQ5W0U4 402 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 CYP4V2Q6ZWL3 525 aaPredicted RBP14.12□□□□□ -0.15
USP49-201ENST00000373006 MAP7D3Q8IWC1 876 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 PPP1R36Q96LQ0 422 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 EBNA1BP2Q99848 306 aaKnown RBP14.12□□□□□ -0.15
USP49-201ENST00000373006 OXCT2Q9BYC2 517 aaPredicted RBP14.12□□□□□ -0.15
USP49-201ENST00000373006 MAGEB5Q9BZ81 275 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 RNPEPQ9H4A4 650 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 RPAP3Q9H6T3 665 aaPredicted RBP14.12□□□□□ -0.15
USP49-201ENST00000373006 ZNF302Q9NR11 478 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 DTNAQ9Y4J8 743 aa14.12□□□□□ -0.15
USP49-201ENST00000373006 M0QYV0 167 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 ADCY6O43306 1168 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 IMPDH2P12268 514 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 ALDH1A3P47895 512 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 CA9Q16790 459 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 MAP3K21Q5TCX8 1036 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 IYDQ6PHW0 289 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 FBXW8Q8N3Y1 598 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 DGCR14Q96DF8 476 aaKnown RBP14.11□□□□□ -0.15
USP49-201ENST00000373006 GRIP2Q9C0E4 1043 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 DHX33Q9H6R0 707 aaKnown RBP14.11□□□□□ -0.15
USP49-201ENST00000373006 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
USP49-201ENST00000373006 ACSS2Q9NR19 701 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 ARHGEF38Q9NXL2 777 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 BTBD7Q9P203 1132 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 SORCS3Q9UPU3 1222 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 DOCK5Q9H7D0 1870 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 FAM159BA6NKW6 160 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 VILLO15195 856 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 CLPTM1O96005 669 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 TFAP2AP05549 437 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 SUPT20HL2P0C7V6 817 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 L1CAMP32004 1257 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 PDE1CQ14123 709 aaPredicted RBP14.11□□□□□ -0.15
USP49-201ENST00000373006 SUPT20HL1Q3ZLR7 823 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 PRAMEF18Q5VWM3 479 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 OR6B2Q6IFH4 312 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 ZNF534Q76KX8 674 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 PQLC3Q8N755 202 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 PPP4R1Q8TF05 950 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 CNBD2Q96M20 576 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 LZTS1Q9Y250 596 aa14.11□□□□□ -0.15
USP49-201ENST00000373006 WDR27A2RRH5 827 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 MICAL2O94851 1124 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 SMIM18P0DKX4 95 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 FDFT1P37268 417 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 GABRB2P47870 512 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 PCLAFQ15004 111 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 KCTD21Q4G0X4 260 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 FAM47CQ5HY64 1035 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 NETO2Q8NC67 525 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 PCDH19Q8TAB3 1148 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 RAB3IL1Q8TBN0 382 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 PIP4K2CQ8TBX8 421 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 PGBD4Q96DM1 585 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 CMTM5Q96DZ9 223 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 MOCOSQ96EN8 888 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 SORT1Q99523 831 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 LHX5Q9H2C1 402 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 MAP3K20Q9NYL2 800 aaKnown RBP14.1□□□□□ -0.15
USP49-201ENST00000373006 HSFX1Q9UBD0 423 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 ITGA11Q9UKX5 1188 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 PSAT1Q9Y617 370 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 SF3B1O75533 1304 aaKnown RBP eCLIP14.1□□□□□ -0.154e-7■■■■■ 133.7
USP49-201ENST00000373006 SMIM31A0A1B0GVY4 71 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 VWA5AO00534 786 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 AIM2O14862 343 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 MED7O43513 233 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 ZBTB14O43829 449 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 FAM189A1O60320 539 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 ITGA2BP08514 1039 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 CDK18Q07002 472 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 ITGA9Q13797 1035 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 SNRNP48Q6IEG0 339 aaKnown RBP14.1□□□□□ -0.15
USP49-201ENST00000373006 SDCCAG8Q86SQ7 713 aaPredicted RBP14.1□□□□□ -0.15
USP49-201ENST00000373006 KBTBD6Q86V97 674 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 TNS4Q8IZW8 715 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 METTL25Q8N6Q8 603 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 RNF148Q8N7C7 305 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 NSUN6Q8TEA1 469 aaKnown RBP14.1□□□□□ -0.15
USP49-201ENST00000373006 ATXN7L3BQ96GX2 97 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 PGLYRP2Q96PD5 576 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 MKS1Q9NXB0 559 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 AK5Q9Y6K8 562 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 APOL1O14791 398 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 MAFGO15525 162 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 PLIN3O60664 434 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 ENDOD1O94919 500 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 ZNF143P52747 638 aaPredicted RBP14.1□□□□□ -0.15
USP49-201ENST00000373006 NADK2Q4G0N4 442 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 KLHDC10Q6PID8 442 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 RTKN2Q8IZC4 609 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 SLC4A11Q8NBS3 891 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 JADE3Q92613 823 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms