RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 ACOX1Q15067 660 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 HLA-DQA1Q5Y7H0 255 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 TTC33Q6PID6 262 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-204ENST00000372922 RSPH1Q8WYR4 309 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 SERPINB11Q96P15 392 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 MFSD1Q9H3U5 465 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 RGS18Q9NS28 235 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 IGF2BP3O00425 579 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRERF1-204ENST00000372922 LSP1P33241 339 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 SERPINB5P36952 375 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 CYP4Z2PQ8N1L4 340 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 KLHL23Q8NBE8 558 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 COLGALT1Q8NBJ5 622 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 LPCAT1Q8NF37 534 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 RIN3Q8TB24 985 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 DCLK3Q9C098 648 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 ACOT9Q9Y305 439 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 TRPV2Q9Y5S1 764 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-204ENST00000372922 OR1E1P30953 314 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRERF1-204ENST00000372922 MAD2L1Q13257 205 aaPredicted RBP10.14□□□□□ -0.79
TRERF1-204ENST00000372922 ATP6AP1LQ52LC2 224 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 FNDC3BQ53EP0 1204 aaKnown RBP10.14□□□□□ -0.79
TRERF1-204ENST00000372922 POP1Q99575 1024 aaKnown RBP10.14□□□□□ -0.79
TRERF1-204ENST00000372922 ACTR8Q9H981 624 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 TRPC4Q9UBN4 977 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 POLG2Q9UHN1 485 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 SNCAIPQ9Y6H5 919 aa10.14□□□□□ -0.79
TRERF1-204ENST00000372922 OR56A5P0C7T3 313 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 SOX6P35712 828 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 PSEN2P49810 448 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CXCL9Q07325 125 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 NCF4Q15080 339 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 TRIM71Q2Q1W2 868 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 GET4Q7L5D6 327 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 DEFB132Q7Z7B7 95 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 NT5DC3Q86UY8 548 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 REPS2Q8NFH8 660 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 REPS1Q96D71 796 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 ELOVL4Q9GZR5 314 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 PRELID1Q9Y255 219 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 MAP3K6O95382 1288 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CTDNEP1O95476 244 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 JAK1P23458 1154 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 ADORA2AP29274 412 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 GRK4P32298 578 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CCT3P49368 545 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 POLR2LP62875 67 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 YWHAZP63104 245 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 MPP3Q13368 585 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 NEK10Q6ZWH5 1172 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 MCRS1Q96EZ8 462 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 PDCD2LQ9BRP1 358 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CYP4F12Q9HCS2 524 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 NR2E3Q9Y5X4 410 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 FRMPD1Q5SYB0 1578 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CCT8L1PA6NM43 557 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 E9PBE3 544 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 RAD51BO15315 384 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 GLRBP48167 497 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CBWD3Q5JTY5 395 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CBWD5Q5RIA9 395 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 RD3Q7Z3Z2 195 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 NOL6Q9H6R4 1146 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 RPRD1BQ9NQG5 326 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 NCKIPSDQ9NZQ3 722 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 KLHL20Q9Y2M5 609 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 MTA2O94776 668 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 VIL1P09327 827 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 TFE3P19532 575 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 C16orf62Q7Z3J2 963 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 PTAR1Q7Z6K3 402 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 LZTR1Q8N653 840 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 RTL3Q8N8U3 475 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 BBS2Q9BXC9 721 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 OSBPL6Q9BZF3 934 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 IGFLR1Q9H665 355 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 STK39Q9UEW8 545 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 E9PCH4 1651 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 PDZK1P1A8MUH7 402 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 TSPAN3O60637 253 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 PROSCO94903 275 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 ZNF7P17097 686 aaPredicted RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 PEX5P50542 639 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 GRSF1Q12849 480 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 FSCN1Q16658 493 aaKnown RBP10.13□□□□□ -0.79
TRERF1-204ENST00000372922 CCDC33Q8N5R6 958 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 DPP10Q8N608 796 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 ATP13A1Q9HD20 1204 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 MSRAQ9UJ68 235 aa10.13□□□□□ -0.79
TRERF1-204ENST00000372922 A0A0A6YYK5 440 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 GHRP10912 638 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 IL1R1P14778 569 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ATP6V1B1P15313 513 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ATP6V1C1P21283 382 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 NR2C2P49116 596 aa10.12□□□□□ -0.79
TRERF1-204ENST00000372922 ALDH5A1P51649 535 aaPredicted RBP10.12□□□□□ -0.79
TRERF1-204ENST00000372922 C1QBPQ07021 282 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms