RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 UBE2ZQ9H832 354 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-204ENST00000372243 ZWILCHQ9H900 591 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 SLC12A6Q9UHW9 1150 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 AP4E1Q9UPM8 1137 aa16.44■□□□□ 0.22
TMEM53-204ENST00000372243 LATS1O95835 1130 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 MARCKSL1P49006 195 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 HARS2P49590 506 aaKnown RBP16.43■□□□□ 0.22
TMEM53-204ENST00000372243 KCNQ1P51787 676 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 CCDC85BQ15834 202 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-204ENST00000372243 DPYSL2Q16555 572 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 EFHC2Q5JST6 749 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 KCNT1Q5JUK3 1230 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 VSIG1Q86XK7 387 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 EXD1Q8NHP7 514 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ADAMTS19Q8TE59 1207 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ING5Q8WYH8 240 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ALG3Q92685 438 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 C1orf74Q96LT6 269 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 DCLK3Q9C098 648 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 OSBPL2Q9H1P3 480 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 CARD9Q9H257 536 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 KIF9Q9HAQ2 790 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ANLNQ9NQW6 1124 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 GKN1Q9NS71 199 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 TDP1Q9NUW8 608 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 CDH22Q9UJ99 828 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ZFP37Q9Y6Q3 630 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-204ENST00000372243 I6L893 689 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ZNF135P52742 658 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ZXDBP98169 803 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 CBX2Q14781 532 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-204ENST00000372243 PDK2Q15119 407 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 SMTNL2Q2TAL5 461 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ATP13A4Q4VNC1 1196 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 POTEHQ6S545 545 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 GET4Q7L5D6 327 aaPredicted RBP16.43■□□□□ 0.22
TMEM53-204ENST00000372243 MAP7D3Q8IWC1 876 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 RCOR2Q8IZ40 523 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 KIAA1958Q8N8K9 716 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 ZSWIM3Q96MP5 696 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 CDH7Q9ULB5 785 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 SNX12Q9UMY4 172 aa16.43■□□□□ 0.22
TMEM53-204ENST00000372243 CES2O00748 559 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 PAGE1O75459 146 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 ZRANB2O95218 330 aaKnown RBP eCLIP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 HMBSP08397 361 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 TCP1P17987 556 aaKnown RBP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 GJC1P36383 396 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 ARSEP51690 589 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 NRG1Q02297 640 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 HTR3DQ70Z44 454 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 ARID3BQ8IVW6 561 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 HSPH1Q92598 858 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 USP13Q92995 863 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 HLA-CQ95604 372 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 RBM41Q96IZ5 413 aaKnown RBP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 TRPV4Q9HBA0 871 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 SMPD4Q9NXE4 827 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 STOML2Q9UJZ1 356 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 LSM7Q9UK45 103 aaKnown RBP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 ZNF510Q9Y2H8 683 aa16.42■□□□□ 0.22
TMEM53-204ENST00000372243 USP15Q9Y4E8 981 aaPredicted RBP16.42■□□□□ 0.22
TMEM53-204ENST00000372243 E2F8A0AVK6 867 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 ZNF487B1APH4 448 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 LEFTY2O00292 366 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 KCNK3O14649 394 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 GREM1O60565 184 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 KRT1P04264 644 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 KCNA5P22460 613 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 KDELR1P24390 212 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 CORO1AP31146 461 aaKnown RBP16.41■□□□□ 0.22
TMEM53-204ENST00000372243 L1CAMP32004 1257 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 SLC11A2P49281 568 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 MLLT6P55198 1093 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-204ENST00000372243 COPS2P61201 443 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 SEMA3BQ13214 749 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 SMAD4Q13485 552 aaKnown RBP16.41■□□□□ 0.22
TMEM53-204ENST00000372243 SKIV2LQ15477 1246 aaKnown RBP16.41■□□□□ 0.22
TMEM53-204ENST00000372243 CA9Q16790 459 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 ODF2Q5BJF6 829 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 Q6ZNB5 142 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 CELF5Q8N6W0 485 aaKnown RBP16.41■□□□□ 0.22
TMEM53-204ENST00000372243 KCTD6Q8NC69 237 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 KIF18AQ8NI77 898 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 SMARCD2Q92925 531 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 PBKQ96KB5 322 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 OSBPL9Q96SU4 736 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 POMKQ9H5K3 350 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 DHX35Q9H5Z1 703 aaKnown RBP16.41■□□□□ 0.22
TMEM53-204ENST00000372243 TMPRSS4Q9NRS4 437 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 OBP2AQ9NY56 170 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 RCOR3Q9P2K3 495 aaPredicted RBP16.41■□□□□ 0.22
TMEM53-204ENST00000372243 OR12D3Q9UGF7 316 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 SH3BP1Q9Y3L3 701 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 SAR1BQ9Y6B6 198 aa16.41■□□□□ 0.22
TMEM53-204ENST00000372243 H3BQ06 376 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms