RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PDZD8Q8NEN9 1154 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 FBXO27Q8NI29 283 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 SDCCAG3Q96C92 435 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 MXRA8Q9BRK3 442 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 IMPG2Q9BZV3 1241 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 CCDC177Q9NQR7 707 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 THAP1Q9NVV9 213 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 LGALS13Q9UHV8 139 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 MOSPD1Q9UJG1 213 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 HRH3Q9Y5N1 445 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 MYH11P35749 1972 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 FRMPD4Q14CM0 1322 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 CLIC2O15247 247 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 TMCC2O75069 709 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 TCEA3O75764 348 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 CIB2O75838 187 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 ZBTB11O95625 1053 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 ACTN1P12814 892 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 UCHL3P15374 230 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 SLC9A1P19634 815 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 NMT1P30419 496 aaKnown RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 PRKCIP41743 596 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 C21orf59P57076 290 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 CHRNEQ04844 493 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 KLHL30Q0D2K2 578 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 SLC18A3Q16572 532 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 EXOC3L4Q17RC7 722 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 KCTD19Q17RG1 926 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 TIGD2Q4W5G0 525 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 ZFYVE27Q5T4F4 411 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 PPP1R26Q5T8A7 1209 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 CIAPIN1Q6FI81 312 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 NANOGP8Q6NSW7 305 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF720Q7Z2F6 126 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 SLC51BQ86UW2 128 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 VPS37AQ8NEZ2 397 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 TOR1AIP2Q8NFQ8 470 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 SLC35C1Q96A29 364 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 FIZ1Q96SL8 496 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 CYTH2Q99418 400 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 RIT2Q99578 217 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 TEKT3Q9BXF9 490 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 NUF2Q9BZD4 464 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 S100A14Q9HCY8 104 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 KCND2Q9NZV8 630 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 STK39Q9UEW8 545 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 VPS51Q9UID3 782 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 SCAF8Q9UPN6 1271 aaKnown RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 SNX24Q9Y343 169 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 B2RBV5 119 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 AP3B1O00203 1094 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 NFIBO00712 420 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 TLR3O15455 904 aaKnown RBP9.12□□□□□ -0.95
ATG4A-203ENST00000372232 GREM1O60565 184 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 INHBBP09529 407 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 THRAP10827 490 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 GLULP15104 373 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 ATP6V1B1P15313 513 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 CTRB1P17538 263 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 ADSLP30566 484 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-203ENST00000372232 FCGRTP55899 365 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 KRT76Q01546 638 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 IFITM2Q01629 132 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 PWP1Q13610 501 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 EFTUD2Q15029 972 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATG4A-203ENST00000372232 ASIC2Q16515 512 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 NFIL3Q16649 462 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 SEZ6Q53EL9 994 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 DCAF17Q5H9S7 520 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-203ENST00000372232 FAM91A1Q658Y4 838 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 CTRB2Q6GPI1 263 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 SLFN11Q7Z7L1 901 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATG4A-203ENST00000372232 ANGPTL6Q8NI99 470 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 OSCP1Q8WVF1 389 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 CLEC4DQ8WXI8 215 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 LPAR1Q92633 364 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 PEX13Q92968 403 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 TMA16Q96EY4 203 aaKnown RBP9.12□□□□□ -0.95
ATG4A-203ENST00000372232 HES6Q96HZ4 224 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 HSH2DQ96JZ2 352 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 RANBP9Q96S59 729 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 LXNQ9BS40 222 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 SHCBP1LQ9BZQ2 653 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 PAIP1Q9H074 479 aaKnown RBP9.12□□□□□ -0.95
ATG4A-203ENST00000372232 IKZF4Q9H2S9 585 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 ACTR10Q9NZ32 417 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 HACD3Q9P035 362 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 PIM2Q9P1W9 311 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 COL20A1Q9P218 1284 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 PCDHGA3Q9Y5H0 932 aa9.12□□□□□ -0.95
ATG4A-203ENST00000372232 KIF13BQ9NQT8 1826 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 A0A087X0T9 212 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 GOLGA8MH3BSY2 632 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 TXNDC9O14530 226 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 CASQ2O14958 399 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 SIN3BO75182 1162 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 TM7SF2O76062 418 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms