RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 RHOBTB2Q9BYZ6 727 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 VPS11Q9H270 941 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 TLE6Q9H808 572 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 RNPEPL1Q9HAU8 725 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 TMEM161AQ9NX61 479 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 ATP11BQ9Y2G3 1177 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 RPL22P35268 128 aaKnown RBP29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 MSS51Q4VC12 460 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 ANKRD20A2Q5SQ80 823 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 ANKRD20A1Q5TYW2 823 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 ANKRD20A3Q5VUR7 823 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 FYB2Q5VWT5 728 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 ANKRD22Q5VYY1 191 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 TMEM86AQ8N2M4 240 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 NDRG1Q92597 394 aaKnown RBP29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 SEPT8Q92599 483 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 KHSRPQ92945 711 aaKnown RBP eCLIP29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 TMEM209Q96SK2 561 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 HNRNPABQ99729 332 aaKnown RBP29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 LNPEPQ9UIQ6 1025 aa29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 PRG3Q9Y2Y8 225 aaPredicted RBP29.32■■■□□ 2.28
SDCCAG3-204ENST00000371725 GOLGA8MH3BSY2 632 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 BANF1O75531 89 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 GNAZP19086 355 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 KDELR1P24390 212 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 SSTR1P30872 391 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 RNASELQ05823 741 aaKnown RBP29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 DSC1Q08554 894 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 HADHQ16836 314 aaKnown RBP29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 WASHC2DQ5SRD0 308 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 COLGALT2Q8IYK4 626 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 BANPQ8N9N5 519 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 MED10Q9BTT4 135 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 TBC1D10AQ9BXI6 508 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 TMEM30AQ9NV96 361 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 TTC3P53804 2025 aa29.31■■■□□ 2.28
SDCCAG3-204ENST00000371725 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 CST8O60676 142 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 LRCH4O75427 683 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 SETSIPP0DME0 302 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 HSPA8P11142 646 aaKnown RBP29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 ODC1P11926 461 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 CALB2P22676 271 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 OR1G1P47890 313 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 LHX1P48742 406 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 CACNA2D1P54289 1103 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 C15orf59Q2T9L4 293 aaPredicted RBP29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 BZW1Q7L1Q6 419 aaKnown RBP29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 FAM13CQ8NE31 585 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 MRRFQ96E11 262 aaKnown RBP29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 PCED1BQ96HM7 432 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 PAFAH2Q99487 392 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 WDR83Q9BRX9 315 aaKnown RBP29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 IL1R2P27930 398 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 GDF10P55107 478 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 SMTNL2Q2TAL5 461 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 DCLRE1AQ6PJP8 1040 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 NLRP9Q7RTR0 991 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 URGCPQ8TCY9 931 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 DCAKDQ8WVC6 231 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 RXFP2Q8WXD0 754 aa29.3■■■□□ 2.28
SDCCAG3-204ENST00000371725 COL6A1P12109 1028 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 BCAR1P56945 870 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 GAD2Q05329 585 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 FBXO46Q6PJ61 603 aaPredicted RBP29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 PIGZQ86VD9 579 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 RSAD2Q8WXG1 361 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 UROC1Q96N76 676 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 DUSP16Q9BY84 665 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 PCDHB7Q9Y5E2 793 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 M0QZQ0 153 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 TROVE2P10155 538 aaKnown RBP eCLIP29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 PTPN4P29074 926 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 LBX1P52954 281 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 KCNT1Q5JUK3 1230 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 CLEC20AQ6ZU45 233 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 LONP2Q86WA8 852 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 ENDOVQ8N8Q3 282 aaKnown RBP29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 FBXO36Q8NEA4 188 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 OR10T2Q8NGX3 314 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 ZWILCHQ9H900 591 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 KRT82Q9NSB4 513 aa29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 SAE1Q9UBE0 346 aaPredicted RBP29.29■■■□□ 2.28
SDCCAG3-204ENST00000371725 LAMA2P24043 3122 aaKnown RBP29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 C2CD4BA6NLJ0 364 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 PEX11AO75192 247 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 ADRA1DP25100 572 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 MAP3K7CLP57077 242 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 SLC6A3Q01959 620 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 EFTUD2Q15029 972 aaKnown RBP eCLIP29.28■■■□□ 2.281e-6■■■■□ 23.2
SDCCAG3-204ENST00000371725 CDO1Q16878 200 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 TAF1BQ53T94 588 aaPredicted RBP29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 TCP10LQ8TDR4 215 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 PCSK1NQ9UHG2 260 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 ZFP69BQ9UJL9 534 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 LRRC42Q9Y546 428 aa29.28■■■□□ 2.28
SDCCAG3-204ENST00000371725 FAM163BP0C2L3 166 aa29.27■■■□□ 2.28
SDCCAG3-204ENST00000371725 SEPT7Q16181 437 aaKnown RBP29.27■■■□□ 2.28
SDCCAG3-204ENST00000371725 PALM2Q8IXS6 379 aa29.27■■■□□ 2.28
SDCCAG3-204ENST00000371725 PDIK1LQ8N165 341 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms