RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 HACE1Q8IYU2 909 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 RFWD2Q8NHY2 731 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 MTBPQ96DY7 904 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 Q9Y3F1 56 aa29.87■■■□□ 2.37
SSBP3-204ENST00000371320 GABRDO14764 452 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 STK10O94804 968 aaKnown RBP29.86■■■□□ 2.37
SSBP3-204ENST00000371320 FAM163BP0C2L3 166 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 BGNP21810 368 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 BMPR2Q13873 1038 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 FSCN1Q16658 493 aaKnown RBP29.86■■■□□ 2.37
SSBP3-204ENST00000371320 NBPF20Q3BBV1 942 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 CDHR3Q6ZTQ4 885 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 RAB3IPQ96QF0 476 aaPredicted RBP29.86■■■□□ 2.37
SSBP3-204ENST00000371320 HAO1Q9UJM8 370 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 F5H423 210 aaPredicted RBP29.86■■■□□ 2.37
SSBP3-204ENST00000371320 CDK16Q00536 496 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 AP1B1Q10567 949 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 NME3Q13232 169 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 PRKD1Q15139 912 aaPredicted RBP29.86■■■□□ 2.37
SSBP3-204ENST00000371320 COLGALT1Q8NBJ5 622 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 LRMDAQ9H2I8 198 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 ZFP69BQ9UJL9 534 aa29.86■■■□□ 2.37
SSBP3-204ENST00000371320 CREB3O43889 395 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 RFPL1O75677 317 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 FAM200BP0CF97 657 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 IGFBP6P24592 240 aaPredicted RBP29.85■■■□□ 2.37
SSBP3-204ENST00000371320 MAP3K7CLP57077 242 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 DEUP1Q05D60 604 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 TAF1BQ53T94 588 aaPredicted RBP29.85■■■□□ 2.37
SSBP3-204ENST00000371320 SYPL2Q5VXT5 272 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 BNIPLQ7Z465 357 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 SLC2A13Q96QE2 648 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 FERMT1Q9BQL6 677 aa29.85■■■□□ 2.37
SSBP3-204ENST00000371320 RARBP10826 455 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 TKTL1P51854 596 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 SPDYAQ5MJ70 313 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 KIAA0319Q5VV43 1072 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 MTDHQ86UE4 582 aaKnown RBP29.84■■■□□ 2.37
SSBP3-204ENST00000371320 NETO2Q8NC67 525 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 DEPDC1BQ8WUY9 529 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 WNT8BQ93098 351 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 TBC1D31Q96DN5 1066 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 STAMBPL1Q96FJ0 436 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 P2RY11Q96G91 374 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 TSPYL2Q9H2G4 693 aaPredicted RBP29.84■■■□□ 2.37
SSBP3-204ENST00000371320 KRT82Q9NSB4 513 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 DDX43Q9NXZ2 648 aaKnown RBP29.84■■■□□ 2.37
SSBP3-204ENST00000371320 KANSL3Q9P2N6 904 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 PLLPQ9Y342 182 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 DOCK3Q8IZD9 2030 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 A0A0G2JND7 137 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 RNF103O00237 685 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 MLNP12872 115 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 HOXC8P31273 242 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 PURAQ00577 322 aaKnown RBP29.84■■■□□ 2.37
SSBP3-204ENST00000371320 PDK1Q15118 436 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 SENP8Q96LD8 212 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 SLC13A1Q9BZW2 595 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 CACNG4Q9UBN1 327 aa29.84■■■□□ 2.37
SSBP3-204ENST00000371320 OPHN1O60890 802 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 CCNFP41002 786 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 E2F5Q15329 346 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 TAF2Q6P1X5 1199 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 CASC4Q6P4E1 433 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 HFE2Q6ZVN8 426 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 CCNYQ8ND76 341 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 TMEM237Q96Q45 408 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 PIGVQ9NUD9 493 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 SLC38A7Q9NVC3 462 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 WDR27A2RRH5 827 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 A8MUI8 341 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 TGDSO95455 350 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 T-ENOLP0DO92 83 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 GLUD2P49448 558 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 SERPINB9P50453 376 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 PREPLQ4J6C6 727 aaPredicted RBP29.83■■■□□ 2.37
SSBP3-204ENST00000371320 ZNF449Q6P9G9 518 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 PDCD7Q8N8D1 485 aaKnown RBP29.83■■■□□ 2.37
SSBP3-204ENST00000371320 OXNAD1Q96HP4 312 aaPredicted RBP29.83■■■□□ 2.37
SSBP3-204ENST00000371320 CRTAC1Q9NQ79 661 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 MOCS1Q9NZB8 636 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 SEPT10Q9P0V9 454 aa29.83■■■□□ 2.37
SSBP3-204ENST00000371320 SF3B1O75533 1304 aaKnown RBP eCLIP29.82■■■□□ 2.364e-6■■■■■ 89.5
SSBP3-204ENST00000371320 MEIS3P2A8K0S8 358 aa29.82■■■□□ 2.36
SSBP3-204ENST00000371320 TAF1CQ15572 869 aaPredicted RBP29.82■■■□□ 2.36
SSBP3-204ENST00000371320 WLSQ5T9L3 541 aa29.82■■■□□ 2.36
SSBP3-204ENST00000371320 MROH9Q5TGP6 573 aa29.82■■■□□ 2.36
SSBP3-204ENST00000371320 CYS1Q717R9 158 aa29.82■■■□□ 2.36
SSBP3-204ENST00000371320 INPP5DQ92835 1189 aa29.82■■■□□ 2.36
SSBP3-204ENST00000371320 MKS1Q9NXB0 559 aa29.82■■■□□ 2.36
SSBP3-204ENST00000371320 SDR42E2A6NKP2 422 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 M0QZ92 97 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 EEF2KO00418 725 aaKnown RBP29.81■■■□□ 2.36
SSBP3-204ENST00000371320 CAPN9O14815 690 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 KLF11O14901 512 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 RASSF2P50749 326 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 ARFIP2P53365 341 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 PARP6Q2NL67 630 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 LRRC8BQ6P9F7 803 aa29.81■■■□□ 2.36
SSBP3-204ENST00000371320 ULBP1Q9BZM6 244 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms