RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 MYLIPQ8WY64 445 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 KAT5Q92993 513 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 CCDC51Q96ER9 411 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 RCC1LQ96I51 464 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 FAXDC2Q96IV6 333 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 FNBP1Q96RU3 617 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 ADAM2Q99965 735 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 ADPGKQ9BRR6 497 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 PI4K2AQ9BTU6 479 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 APOL6Q9BWW8 343 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 NAA15Q9BXJ9 866 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 ASPNQ9BXN1 380 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 MKRN2Q9H000 416 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 WNT8AQ9H1J5 351 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 APOBEC3GQ9HC16 384 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 PLCB1Q9NQ66 1216 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 C14orf119Q9NWQ9 140 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 MIOSQ9NXC5 875 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 LUZP4Q9P127 313 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 WHRNQ9P202 907 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 SIX4Q9UIU6 781 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 TBX21Q9UL17 535 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 ATP11BQ9Y2G3 1177 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 ANKRD6Q9Y2G4 727 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 COQ6Q9Y2Z9 468 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 IPPQ9Y573 584 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 PCDHB2Q9Y5E7 798 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 FHOD1Q9Y613 1164 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 MKI67P46013 3256 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 A0A1W2PQJ5 194 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 TRIM43BA6NCK2 446 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 GOLGA6L6A8MZA4 724 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 STX10O60499 249 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 N4BP1O75113 896 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 MFAP3LO75121 409 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 ZNF623O75123 536 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 PPM1BO75688 479 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 RECQL4O94761 1208 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 LTFP02788 710 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 UCHL3P15374 230 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 ATF7P17544 494 aaPredicted RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 ITGB8P26012 769 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 RPL10P27635 214 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 KRT9P35527 623 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 CCL23P55773 120 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 GSDMDP57764 484 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 FAM189BP81408 668 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 CCZ1BP86790 482 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 CCZ1P86791 482 aaPredicted RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 RBM10P98175 930 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 KLF1Q13351 362 aaPredicted RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 AUHQ13825 339 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 SURF1Q15526 300 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 KYAT1Q16773 422 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 TIGD5Q53EQ6 642 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 XKR4Q5GH76 650 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 TWF2Q6IBS0 349 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 SPOPLQ6IQ16 392 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 WDR59Q6PJI9 974 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 USP53Q70EK8 1073 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 TRAPPC11Q7Z392 1133 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 WDR49Q8IV35 697 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 CMTR2Q8IYT2 770 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 USP38Q8NB14 1042 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 FBXL13Q8NEE6 735 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 NEK11Q8NG66 645 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 CHTF18Q8WVB6 975 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 KCTD13Q8WZ19 329 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 LPPQ93052 612 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 C18orf25Q96B23 403 aaPredicted RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 TRIM43Q96BQ3 446 aaPredicted RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 SNX27Q96L92 541 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 ELAC2Q9BQ52 826 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 NUP58Q9BVL2 599 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 CCDC94Q9BW85 323 aaPredicted RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 EDEM3Q9BZQ6 932 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 MTMR12Q9C0I1 747 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 GPR88Q9GZN0 384 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.79□□□□□ -1.8
MCF2-202ENST00000370573 HIPK3Q9H422 1215 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 ASB7Q9H672 318 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 NLRC4Q9NPP4 1024 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 THG1LQ9NWX6 298 aaKnown RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 RAB20Q9NX57 234 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 GCNT4Q9P109 453 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 FBXO9Q9UK97 447 aaPredicted RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 DNAJC12Q9UKB3 198 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 PNMA8BQ9ULN7 279 aaPredicted RBP3.79□□□□□ -1.8
MCF2-202ENST00000370573 PHTF1Q9UMS5 762 aa3.79□□□□□ -1.8
MCF2-202ENST00000370573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.79□□□□□ -1.8
MCF2-202ENST00000370573 SCN5AQ14524 2016 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 A0A0U1RQF3 1178 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 SMIM28A0A1B0GU29 152 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 ANO9A1A5B4 782 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PTGESO14684 152 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 ZRANB2O95218 330 aaKnown RBP eCLIP3.78□□□□□ -1.8
MCF2-202ENST00000370573 ZGLP1P0C6A0 271 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 PNMA6AP0CW24 399 aaPredicted RBP3.78□□□□□ -1.8
MCF2-202ENST00000370573 ITGA4P13612 1032 aa3.78□□□□□ -1.8
MCF2-202ENST00000370573 RAC2P15153 192 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms