RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CPXM2Q8N436 756 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 ATP6V0D2Q8N8Y2 350 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 JOSD2Q8TAC2 188 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 CHFRQ96EP1 664 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 SLC39A13Q96H72 371 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 VCPIP1Q96JH7 1222 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 NELL2Q99435 816 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 NPY6RQ99463 290 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 DDX50Q9BQ39 737 aaKnown RBP15.41■□□□□ 0.06
COL9A1-204ENST00000370496 MARK1Q9P0L2 795 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 SLC12A6Q9UHW9 1150 aa15.41■□□□□ 0.06
COL9A1-204ENST00000370496 A0A087X0T9 212 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 TYW5A2RUC4 315 aaKnown RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 SHISA7A6NL88 538 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 AKR1B10O60218 316 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 ACSL4O60488 711 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 ADCY5O95622 1261 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 DCNP07585 359 aaKnown RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 FAM228BP0C875 321 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 MYBL1P10243 752 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 TYRP14679 529 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 PDGFRAP16234 1089 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 TFE3P19532 575 aaPredicted RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 GPD1P21695 349 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 RDXP35241 583 aaKnown RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 ATP11AP98196 1134 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 ADGRF1Q5T601 910 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 NAIF1Q69YI7 327 aaPredicted RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 TRNP1Q6NT89 227 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 WDR59Q6PJI9 974 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 C12orf40Q86WS4 652 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 CHSY1Q86X52 802 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 FAM217AQ8IXS0 508 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 NAT16Q8N8M0 369 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 DDI1Q8WTU0 396 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 RXFP2Q8WXD0 754 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 BTN2A3PQ96KV6 586 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 XPO6Q96QU8 1125 aaKnown RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 OSBPL6Q9BZF3 934 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 PIGVQ9NUD9 493 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 PARVAQ9NVD7 372 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 DNAJC17Q9NVM6 304 aaKnown RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 PLK2Q9NYY3 685 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 CNOT8Q9UFF9 292 aaKnown RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 MTF2Q9Y483 593 aaPredicted RBP15.4■□□□□ 0.06
COL9A1-204ENST00000370496 SCINQ9Y6U3 715 aa15.4■□□□□ 0.06
COL9A1-204ENST00000370496 F5P12259 2224 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 SSU72P8A0A1W2PR75 194 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 C2CD4BA6NLJ0 364 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 SIGLEC16A6NMB1 481 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 TRDMT1O14717 391 aaKnown RBP15.39■□□□□ 0.05
COL9A1-204ENST00000370496 CACNG3O60359 315 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 TSPAN3O60637 253 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 F9P00740 461 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 CDC25BP30305 580 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 RFC1P35251 1148 aaPredicted RBP15.39■□□□□ 0.05
COL9A1-204ENST00000370496 OPRD1P41143 372 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 EIF2DP41214 584 aaKnown RBP15.39■□□□□ 0.05
COL9A1-204ENST00000370496 PTPN9P43378 593 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 GFPT1Q06210 699 aaPredicted RBP15.39■□□□□ 0.05
COL9A1-204ENST00000370496 MTA1Q13330 715 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 PPP2R5DQ14738 602 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 GAB4Q2WGN9 574 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 TMEM196Q5HYL7 178 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 CCDC122Q5T0U0 273 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 ALKBH5Q6P6C2 394 aaKnown RBP15.39■□□□□ 0.05
COL9A1-204ENST00000370496 TMEM105Q8N8V8 129 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 NT5C3BQ969T7 300 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 AZIN2Q96A70 460 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 PGAP3Q96FM1 320 aaPredicted RBP15.39■□□□□ 0.05
COL9A1-204ENST00000370496 ISCUQ9H1K1 167 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 TMEM51Q9NW97 253 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 CALCOCO1Q9P1Z2 691 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 MYO1AQ9UBC5 1043 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 STOML2Q9UJZ1 356 aa15.39■□□□□ 0.05
COL9A1-204ENST00000370496 TCRBV5S1A1TA0A578 114 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 KCNU1A8MYU2 1149 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 PI15O43692 258 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 TULP3O75386 442 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 DRD1P21728 446 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 SLC6A4P31645 630 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 MAGEA9P43362 315 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 SLC18A3Q16572 532 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 C15orf59Q2T9L4 293 aaPredicted RBP15.38■□□□□ 0.05
COL9A1-204ENST00000370496 PREPLQ4J6C6 727 aaPredicted RBP15.38■□□□□ 0.05
COL9A1-204ENST00000370496 MPPE1Q53F39 396 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 FAM133BQ5BKY9 247 aaKnown RBP15.38■□□□□ 0.05
COL9A1-204ENST00000370496 DGKKQ5KSL6 1271 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 BRMS1LQ5PSV4 323 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 RAP1GAP2Q684P5 730 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 NADSYN1Q6IA69 706 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 GRAMD4Q6IC98 578 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 FSTL4Q6MZW2 842 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 RFWD3Q6PCD5 774 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 TC2NQ8N9U0 490 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 HJURPQ8NCD3 748 aaPredicted RBP15.38■□□□□ 0.05
COL9A1-204ENST00000370496 FAM172AQ8WUF8 416 aa15.38■□□□□ 0.05
COL9A1-204ENST00000370496 CCDC42Q96M95 316 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms