RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 TRIM68Q6AZZ1 485 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ZDHHC24Q6UX98 284 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 DBF4BQ8NFT6 615 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 BLOC1S5Q8TDH9 187 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 FAM129AQ9BZQ8 928 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 RAB6CQ9H0N0 254 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 LRRC4CQ9HCJ2 640 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ETNK2Q9NVF9 386 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 GTSE1Q9NYZ3 720 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 IL1RAPL1Q9NZN1 696 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 PCDHB5Q9Y5E4 795 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ADGRA2Q96PE1 1338 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ADRA1DP25100 572 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 CPA2P48052 419 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 HARS2P49590 506 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 HTRA3P83110 453 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 KDSRQ06136 332 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 NSUN2Q08J23 767 aaKnown RBP eCLIP7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 CHI3L2Q15782 390 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ANKRD20A2Q5SQ80 823 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ANKRD20A1Q5TYW2 823 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 CST9Q5W186 159 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 SLC26A11Q86WA9 606 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 TRIB2Q92519 343 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 CSPG4P5Q96PW8 444 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ZIC5Q96T25 663 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 HERPUD2Q9BSE4 406 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ECT2Q9H8V3 914 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 MPP6Q9NZW5 540 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 CYTH4Q9UIA0 394 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 CDH9Q9ULB4 789 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 PHTF1Q9UMS5 762 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 GIT1Q9Y2X7 761 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 BRWD3Q6RI45 1802 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 COL4A5P29400 1685 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 A0A1W2PPM1 405 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 NEMP1O14524 444 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 XPO1O14980 1071 aaKnown RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 GYG2O15488 501 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 TSPAN3O60637 253 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 DCTN3O75935 186 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 XPAP23025 273 aaPredicted RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 HOXA11P31270 313 aaPredicted RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 SOX4Q06945 474 aaPredicted RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 PCBP1Q15365 356 aaKnown RBP eCLIP7.34□□□□□ -1.243e-6■□□□□ 9.7
TGFBR3-202ENST00000370399 SNCBQ16143 134 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 SLC45A4Q5BKX6 768 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 TTC39BQ5VTQ0 682 aaPredicted RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 SYPL2Q5VXT5 272 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 ARHGAP24Q8N264 748 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 AFAP1L2Q8N4X5 818 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 MSL3Q8N5Y2 521 aaKnown RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 PPFIBP2Q8ND30 876 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 OR52K1Q8NGK4 314 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 SCAMP5Q8TAC9 235 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 GCNAQ96QF7 691 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 FRMD8P1Q9BZ68 369 aaPredicted RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 TASP1Q9H6P5 420 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 MANSC1Q9H8J5 431 aa7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 ACTR5Q9H9F9 607 aaPredicted RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 AGO3Q9H9G7 860 aaKnown RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.24
TGFBR3-202ENST00000370399 ADAMTSL1Q8N6G6 1762 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 CEP290O15078 2479 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 CITO14578 2027 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 VGLL3A8MV65 326 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 BUD23O43709 281 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 SPAG6O75602 509 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 SOAT2O75908 522 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 HAUS5O94927 633 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 CKMP06732 381 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 ERVK-10P10266 1014 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 GRK4P32298 578 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 FDFT1P37268 417 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 ALDH18A1P54886 795 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 STX3Q13277 289 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 NAA25Q14CX7 972 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 NAPEPLDQ6IQ20 393 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 ZNF572Q7Z3I7 529 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 RIBC1Q8N443 379 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 RAB3IPQ96QF0 476 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 IARS2Q9NSE4 1012 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 KANSL3Q9P2N6 904 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 GTF2IRD1Q9UHL9 959 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 SMAPO00193 183 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 TRDMT1O14717 391 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 YWHAQP27348 245 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 RPA3P35244 121 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 ADRA1BP35368 520 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 TBX4P57082 545 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 GAD2Q05329 585 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 FAM187BQ17R55 369 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 MMEL1Q495T6 779 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 TOP6BLQ8N6T0 577 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 PCDH19Q8TAB3 1148 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 FNIP1Q8TF40 1166 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 CPT1BQ92523 772 aa7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 ALKBH8Q96BT7 664 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-202ENST00000370399 SCLYQ96I15 445 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms