RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 TMCO5AQ8N6Q1 288 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 CASP10Q92851 521 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 VPS11Q9H270 941 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 SPO11Q9Y5K1 396 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 TM9SF1O15321 606 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 PTPRAP18433 802 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 UBA1P22314 1058 aaKnown RBP16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 RPL5P46777 297 aaKnown RBP16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 FOLH1Q04609 750 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 EN1Q05925 392 aaPredicted RBP16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 KRT81Q14533 505 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 OR6B2Q6IFH4 312 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 C16orf87Q6PH81 154 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 ZBTB8OSQ8IWT0 167 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 MICALL2Q8IY33 904 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 ULK2Q8IYT8 1036 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 ARHGAP24Q8N264 748 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 GSDMBQ8TAX9 411 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 RAB3IL1Q8TBN0 382 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 CCDC110Q8TBZ0 833 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 TWNKQ96RR1 684 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 NGRNQ9NPE2 291 aaKnown RBP16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 CYLDQ9NQC7 956 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 PPARGC1AQ9UBK2 798 aaKnown RBP16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 CYB561D2O14569 222 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 MSCO60682 206 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 RARBP10826 455 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 ASPAP45381 313 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 EIF2B2P49770 351 aaKnown RBP16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 RGS7P49802 495 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 LAMTOR4Q0VGL1 99 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 PPP6R3Q5H9R7 873 aaPredicted RBP16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 CDHR3Q6ZTQ4 885 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 RILPQ96NA2 401 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 DCUN1D5Q9BTE7 237 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 TRNAU1APQ9NX07 287 aaKnown RBP16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 PACSIN3Q9UKS6 424 aa16.48■□□□□ 0.23
SYNCRIP-202ENST00000369622 COL4A5P29400 1685 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 PIGRP01833 764 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 EEF1DP3Q658K8 133 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 ARID3BQ8IVW6 561 aaPredicted RBP16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 MTMR14Q8NCE2 650 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 PCYT2Q99447 389 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 ACO2Q99798 780 aaKnown RBP16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 AS3MTQ9HBK9 375 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 AFG3L2Q9Y4W6 797 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 APOC4-APOC2K7ER74 178 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 UGT1A9O60656 530 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 APOC2P02655 101 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 ENPEPQ07075 957 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 CYTH1Q15438 398 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 POLNQ7Z5Q5 900 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 TMIGD2Q96BF3 282 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 ALKBH8Q96BT7 664 aaKnown RBP16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 PPCSQ9HAB8 311 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 UGT1A7Q9HAW7 530 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 UGT1A10Q9HAW8 530 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 UGT1A8Q9HAW9 530 aa16.47■□□□□ 0.23
SYNCRIP-202ENST00000369622 E5RJQ4 531 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 NDC80O14777 642 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 MED7O43513 233 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 ITGB3P05106 788 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 PDGFRAP16234 1089 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 RCVRNP35243 200 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 RASA2Q15283 850 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 TLR1Q15399 786 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 ITPRIPL1Q6GPH6 555 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 UGT2A3Q6UWM9 527 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 XYLT1Q86Y38 959 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 NUP93Q8N1F7 819 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 GALNT4Q8N4A0 578 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 ZNF276Q8N554 614 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 REPS2Q8NFH8 660 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 RSPH1Q8WYR4 309 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 ACAP3Q96P50 834 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 ZC3H7BQ9UGR2 993 aaKnown RBP16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 A0A1W2PQ67 120 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 CXorf49A8MYA2 514 aaPredicted RBP16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 I3L4J1 428 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 PDE1BQ01064 536 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 CCDC142Q17RM4 750 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 RABGAP1LQ5R372 815 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 MROH9Q5TGP6 573 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 ZCCHC23Q6ZST2 131 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 UBR7Q8N806 425 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 MZB1Q8WU39 189 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 CCDC28BQ9BUN5 200 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 TMEM134Q9H6X4 195 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 CYP4F11Q9HBI6 524 aa16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 HBS1LQ9Y450 684 aaKnown RBP16.46■□□□□ 0.23
SYNCRIP-202ENST00000369622 XPO1O14980 1071 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 KRT38O76015 456 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 CDK16Q00536 496 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ITGA9Q13797 1035 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ZPBP2Q6X784 338 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 AMIGO2Q86SJ2 522 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms