RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 FTCDO95954 541 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 UQCRHP07919 91 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 ATF2P15336 505 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 FCARP24071 287 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 MAGEA11P43364 429 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 PSMC1P62191 440 aaKnown RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 SLC6A3Q01959 620 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 CSTF1Q05048 431 aaKnown RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 TAZQ16635 292 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 EFHC1Q5JVL4 640 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 TMEM164Q5U3C3 297 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 PM20D1Q6GTS8 502 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 ZNF280DQ6N043 979 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 PMF1Q6P1K2 205 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 OLFML1Q6UWY5 402 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 VSTM1Q6UX27 236 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 PDZD4Q76G19 769 aaPredicted RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 TCEAL8Q8IYN2 117 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 C12orf29Q8N999 325 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 FAM71BQ8TC56 605 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 HNRNPLLQ8WVV9 542 aaKnown RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 CENPIQ92674 756 aaPredicted RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 SLCO2A1Q92959 643 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 NT5C3BQ969T7 300 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 SMARCD1Q96GM5 515 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 PKNOX2Q96KN3 472 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 SYT15Q9BQS2 421 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 CNPY3Q9BT09 278 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 DDX23Q9BUQ8 820 aaKnown RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 TRIM62Q9BVG3 475 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 CRISPLD1Q9H336 500 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 SLITRK6Q9H5Y7 841 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 LTB4R2Q9NPC1 389 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 CRTAC1Q9NQ79 661 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 HOMER3Q9NSC5 361 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 COMMD8Q9NX08 183 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 DDX56Q9NY93 547 aaKnown RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 KIAA1549LQ6ZVL6 1849 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 CACNA1AO00555 2505 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 HELZP42694 1942 aaKnown RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 FAM92AA1XBS5 289 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 SHISA7A6NL88 538 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 PDE2AO00408 941 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 KCNK3O14649 394 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 PAPSS1O43252 624 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 LAMTOR5O43504 91 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 MOSPD3O75425 235 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 ECI2O75521 394 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 KRT7P08729 469 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 POU2F2P09086 479 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 TNFRSF8P28908 595 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 GDI1P31150 447 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 RFC1P35251 1148 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 ZNF135P52742 658 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 AIF1P55008 147 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 RPL7AP62424 266 aaKnown RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 TSPY1Q01534 308 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 PFKPQ01813 784 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 PRKCQQ04759 706 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 YWHAHQ04917 246 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 NR1H3Q13133 447 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 MESDQ14696 234 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 TEAD2Q15562 447 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 GOLGA7BQ2TAP0 167 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 BOLA3Q53S33 107 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 STXBP5Q5T5C0 1151 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 CYP4A22Q5TCH4 519 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 CCDC181Q5TID7 509 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 DRICH1Q6PGQ1 229 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 DCUN1D2Q6PH85 259 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 C4orf50Q6ZRC1 276 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 CLEC20AQ6ZU45 233 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 STRADAQ7RTN6 431 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 PASD1Q8IV76 773 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 RCOR2Q8IZ40 523 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 DCP1BQ8IZD4 617 aaKnown RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 ZNF276Q8N554 614 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 TTC9BQ8N6N2 239 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 C12orf50Q8NA57 414 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 TTC8Q8TAM2 541 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 SLC2A14Q8TDB8 520 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 TEKT4Q8WW24 435 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 ALG3Q92685 438 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 RMDN1Q96DB5 314 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 RSPRY1Q96DX4 576 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 PGAP3Q96FM1 320 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 RBM41Q96IZ5 413 aaKnown RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 ZNF512Q96ME7 567 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 TMEM209Q96SK2 561 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 FRMD8P1Q9BZ68 369 aaPredicted RBP9.16□□□□□ -0.94
SNX27-201ENST00000368838 BRD9Q9H8M2 597 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 IL37Q9NZH6 218 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 USP3Q9Y6I4 520 aa9.16□□□□□ -0.94
SNX27-201ENST00000368838 PTPRDP23468 1912 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 CCDC151A5D8V7 595 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 E5RJQ4 531 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 SPOPO43791 374 aa9.15□□□□□ -0.94
SNX27-201ENST00000368838 HSF2BPO75031 334 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms