RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 BTN2A3PQ96KV6 586 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 FCRL2Q96LA5 508 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-202ENST00000368662 C1orf74Q96LT6 269 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 EPAS1Q99814 870 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 TRPC7Q9HCX4 862 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 HOMER3Q9NSC5 361 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 GPATCH2LQ9NWQ4 482 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 MTMR10Q9NXD2 777 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 DNMT3BQ9UBC3 853 aaKnown RBP12.76□□□□□ -0.37
TUBE1-202ENST00000368662 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-202ENST00000368662 TRIOBPQ9H2D6 2365 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 A0A1W2PRU2 124 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 C2orf78A6NCI8 922 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 H3BRJ5 948 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 RHOP08100 348 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 CD48P09326 243 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 HDCP19113 662 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 HCAR3P49019 387 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 HARS2P49590 506 aaKnown RBP12.76□□□□□ -0.37
TUBE1-202ENST00000368662 KLF1Q13351 362 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-202ENST00000368662 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-202ENST00000368662 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-202ENST00000368662 PIDD1Q9HB75 910 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 OR12D3Q9UGF7 316 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 ATG2AQ2TAZ0 1938 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 TRAV19A0A0A6YYK7 116 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 MBL2P11226 248 aaPredicted RBP12.75□□□□□ -0.37
TUBE1-202ENST00000368662 ZFXP17010 805 aaPredicted RBP12.75□□□□□ -0.37
TUBE1-202ENST00000368662 ANKRD20A8PQ5CZ79 823 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 KAZNQ674X7 775 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 RFX6Q8HWS3 928 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 TTC13Q8NBP0 860 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
TUBE1-202ENST00000368662 TSC1Q92574 1164 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 ZNF707Q96C28 371 aaPredicted RBP12.75□□□□□ -0.37
TUBE1-202ENST00000368662 RNF157Q96PX1 679 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 HEMGNQ9BXL5 484 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 IGFLR1Q9H665 355 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 HCFC1R1Q9NWW0 138 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 SMARCAL1Q9NZC9 954 aa12.75□□□□□ -0.37
TUBE1-202ENST00000368662 EFCAB8A8MWE9 144 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 EEF2KO00418 725 aaKnown RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 PAGE1O75459 146 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 CKMP06732 381 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 KRT10P13645 584 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 IL4RP24394 825 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 SLC7A9P82251 487 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 CYP4F8P98187 520 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 NRG1Q02297 640 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 HYAL1Q12794 435 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 SEMA3BQ13214 749 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 TCEAL5Q5H9L2 206 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 ZNF697Q5TEC3 545 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 BBS12Q6ZW61 710 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 AZIN2Q96A70 460 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 CSPG4P5Q96PW8 444 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 KLF16Q9BXK1 252 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 FRMD8P1Q9BZ68 369 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 RNF38Q9H0F5 515 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 ANLNQ9NQW6 1124 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 I6L893 689 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 CREB3O43889 395 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 CST8O60676 142 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 MOCS2O96007 188 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 GOT1P17174 413 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 POU3F3P20264 500 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 SLC11A2P49281 568 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 TPI1P60174 286 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 ANKS1BQ7Z6G8 1248 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 GRASPQ7Z6J2 395 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 PYROXD2Q8N2H3 581 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 ARL14EPQ8N8R7 260 aaPredicted RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 MAB21L3Q8N8X9 362 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 VN1R2Q8NFZ6 395 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 SHKBP1Q8TBC3 707 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 RUNDC3BQ96NL0 473 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 AP1M1Q9BXS5 423 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 DCLK3Q9C098 648 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 PRDM12Q9H4Q4 367 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 TMPRSS4Q9NRS4 437 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 RBM12Q9NTZ6 932 aaKnown RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
TUBE1-202ENST00000368662 STIM2Q9P246 746 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 ANAPC1Q9H1A4 1944 aa12.74□□□□□ -0.37
TUBE1-202ENST00000368662 APOC4-APOC2K7ER74 178 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 APOL1O14791 398 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 DAPK3O43293 454 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 LATS1O95835 1130 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 APOC2P02655 101 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 TGM2P21980 687 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 AVPR1AP37288 418 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 CCR2P41597 374 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 MLLT6P55198 1093 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-202ENST00000368662 MMRN1Q13201 1228 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 PRSS36Q5K4E3 855 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 SLC9A4Q6AI14 798 aa12.73□□□□□ -0.37
TUBE1-202ENST00000368662 CCDC70Q6NSX1 233 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms