RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PDCL3Q9H2J4 239 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 IP6K2Q9UHH9 426 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 AGAP1Q9UPQ3 857 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 EMC9Q9Y3B6 208 aa9.22□□□□□ -0.93
TPM3-213ENST00000368545 SCN1AP35498 2009 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 CCDC189A1A4V9 331 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 LINC01553A4QN01 128 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 SHOXO15266 292 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 LSM8O95777 96 aaKnown RBP9.21□□□□□ -0.94
TPM3-213ENST00000368545 PAEPP09466 180 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 MYBL1P10243 752 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 UNGP13051 313 aaPredicted RBP9.21□□□□□ -0.94
TPM3-213ENST00000368545 CYP3A5P20815 502 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 ABCB4P21439 1286 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 CKAP4Q07065 602 aaKnown RBP9.21□□□□□ -0.94
TPM3-213ENST00000368545 ZBTB6Q15916 424 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 FBXO47Q5MNV8 452 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 ACAD10Q6JQN1 1059 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 SCARA5Q6ZMJ2 495 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 ZNF560Q96MR9 790 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 PCDHB18PQ96TA0 734 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 PHF7Q9BWX1 381 aaPredicted RBP9.21□□□□□ -0.94
TPM3-213ENST00000368545 CERS4Q9HA82 394 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 ACP6Q9NPH0 428 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 AVENQ9NQS1 362 aaPredicted RBP9.21□□□□□ -0.94
TPM3-213ENST00000368545 FAM105AQ9NUU6 356 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 TAS2R14Q9NYV8 317 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
TPM3-213ENST00000368545 GTF3C4Q9UKN8 822 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 SNX12Q9UMY4 172 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 HYOU1Q9Y4L1 999 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 HES2Q9Y543 173 aa9.21□□□□□ -0.94
TPM3-213ENST00000368545 GRID2IPA4D2P6 1211 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 EFCAB8A8MWE9 144 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 IFRD1O00458 451 aaPredicted RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 THAP12O43422 761 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 MED7O43513 233 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 PPM1BO75688 479 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 AMHP03971 560 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 CYP1A1P04798 512 aaPredicted RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 SRGAP2BP0DMP2 458 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 PYGMP11217 842 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 CD58P19256 250 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 PNPLA4P41247 253 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 NSFP46459 744 aaKnown RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 SETDB1Q15047 1291 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 TRIM71Q2Q1W2 868 aaKnown RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 C10orf62Q5T681 223 aaPredicted RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 HID1Q8IV36 788 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 SMG8Q8ND04 991 aaKnown RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 SLC35G2Q8TBE7 412 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 ZMAT2Q96NC0 199 aaKnown RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 RTP3Q9BQQ7 232 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 APOL6Q9BWW8 343 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 CARD6Q9BX69 1037 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 ERVK-5Q9HDB9 667 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 TRMT13Q9NUP7 481 aaKnown RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 UVRAGQ9P2Y5 699 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 TRAF6Q9Y4K3 522 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 CEP83Q9Y592 693 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 LOC100289279A0A1B0GTE1 492 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 SMIM28A0A1B0GU29 152 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 VSTM5A8MXK1 200 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 TM4SF5O14894 197 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 SH3BP5O60239 455 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 MTA2O94776 668 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 FBXO21O94952 628 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 CXCL10P02778 98 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 CD247P20963 164 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 AKAP5P24588 427 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 WDR5P61964 334 aaKnown RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 INCA1Q0VD86 236 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 PIK3R6Q5UE93 754 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 C11orf63Q6NUN7 778 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 SLFN11Q7Z7L1 901 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 LRRC57Q8N9N7 239 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 ZNF606Q8WXB4 792 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 ZNF653Q96CK0 615 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 VCPIP1Q96JH7 1222 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 RPGRIP1Q96KN7 1286 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 MAGEB10Q96LZ2 347 aaPredicted RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 ZNF518BQ9C0D4 1074 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 MKRN2Q9H000 416 aaKnown RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.2□□□□□ -0.94
TPM3-213ENST00000368545 SLC38A7Q9NVC3 462 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 CLDND1Q9NY35 253 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 PLA2G2EQ9NZK7 142 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 WHRNQ9P202 907 aa9.2□□□□□ -0.94
TPM3-213ENST00000368545 TDRD15B5MCY1 1934 aaKnown RBP9.2□□□□□ -0.94
TPM3-213ENST00000368545 DNAH12Q6ZR08 3092 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 CES2O00748 559 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 CYP1A2P05177 515 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 WEE2P0C1S8 567 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 ITGA4P13612 1032 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 ADH6P28332 368 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 NOMO3P69849 1222 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 GPM6BQ13491 265 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 TCEAL5Q5H9L2 206 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 GLRA4Q5JXX5 417 aa9.19□□□□□ -0.94
TPM3-213ENST00000368545 C9orf57Q5W0N0 161 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms