RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TTC9BQ8N6N2 239 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 TOP6BLQ8N6T0 577 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 SMOQ99835 787 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 PHF24Q9UPV7 400 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 NAALADL1Q9UQQ1 740 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 HEY1Q9Y5J3 304 aa11.04□□□□□ -0.64
TPM3-212ENST00000368533 EXOC1LA0A1B0GW35 172 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 CFAP73A6NFT4 308 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 SGK1O00141 431 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 PSTPIP1O43586 416 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 FAM200BP0CF97 657 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 NPR3P17342 541 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 CYP2F1P24903 491 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
TPM3-212ENST00000368533 ARSEP51690 589 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 CCNG2Q16589 344 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 SYDE1Q6ZW31 735 aaPredicted RBP11.03□□□□□ -0.64
TPM3-212ENST00000368533 MRPL10Q7Z7H8 261 aaKnown RBP11.03□□□□□ -0.64
TPM3-212ENST00000368533 FAM35AQ86V20 835 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 CRYBG2Q8N1P7 616 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 P3H4Q92791 437 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 TBCBQ99426 244 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 TMEM109Q9BVC6 243 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 RGS18Q9NS28 235 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 MFHAS1Q9Y4C4 1052 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 TBKBP1A7MCY6 615 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 ENPP3O14638 875 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 PRPSAP2O60256 369 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 ZNF623O75123 536 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 SUN1O94901 812 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 GNRH1P01148 92 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 WARSP23381 471 aaKnown RBP11.03□□□□□ -0.64
TPM3-212ENST00000368533 IVDP26440 423 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 MAGEA4P43358 317 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 CAV1Q03135 178 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 CUL3Q13618 768 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 SLC39A12Q504Y0 691 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 KATNAL2Q8IYT4 538 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 CCDC185Q8N715 623 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 ZMIZ2Q8NF64 920 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 RSPH1Q8WYR4 309 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 TMEM237Q96Q45 408 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
TPM3-212ENST00000368533 TSEN34Q9BSV6 310 aaKnown RBP11.03□□□□□ -0.64
TPM3-212ENST00000368533 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 DHX35Q9H5Z1 703 aaKnown RBP11.03□□□□□ -0.64
TPM3-212ENST00000368533 PAK6Q9NQU5 681 aaPredicted RBP11.03□□□□□ -0.64
TPM3-212ENST00000368533 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 PCDHB7Q9Y5E2 793 aa11.03□□□□□ -0.64
TPM3-212ENST00000368533 YJEFN3A6XGL0 299 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 E7ENQ6 273 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 TP73O15350 636 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 TADA2AO75478 443 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 ACRP10323 421 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 RPL17P18621 184 aaKnown RBP11.02□□□□□ -0.64
TPM3-212ENST00000368533 PGFP49763 221 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 ZNF143P52747 638 aaPredicted RBP11.02□□□□□ -0.64
TPM3-212ENST00000368533 KRT81Q14533 505 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 HADHQ16836 314 aaKnown RBP11.02□□□□□ -0.64
TPM3-212ENST00000368533 FOXB2Q5VYV0 432 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 MFSD5Q6N075 450 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 FITM2Q8N6M3 262 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 BBOF1Q8ND07 529 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 PAWRQ96IZ0 340 aaKnown RBP11.02□□□□□ -0.64
TPM3-212ENST00000368533 DUSP16Q9BY84 665 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 LNPEPQ9UIQ6 1025 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 NEU2Q9Y3R4 380 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 SNX10Q9Y5X0 201 aa11.02□□□□□ -0.64
TPM3-212ENST00000368533 CAPN9O14815 690 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 LUC7L3O95232 432 aaKnown RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 GSTA1P08263 222 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 ODC1P11926 461 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 GABRB2P47870 512 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 COPS2P61201 443 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 FAM171A1Q5VUB5 890 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 TMEM110Q86TL2 294 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 CCNJLQ8IV13 435 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 TTC16Q8NEE8 873 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 EXD1Q8NHP7 514 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 ASNSD1Q9NWL6 643 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 KIAA1257Q9ULG3 409 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 USP15Q9Y4E8 981 aaPredicted RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 GABRDO14764 452 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 CDH16O75309 829 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 TJP3O95049 919 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 TRUB2O95900 331 aaKnown RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 GM2AP17900 193 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 SP100P23497 879 aaPredicted RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 KDELR1P24390 212 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 TPP2P29144 1249 aaPredicted RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 CDKN2BP42772 138 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 SULT1E1P49888 294 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 CDK7P50613 346 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 HDAC4P56524 1084 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 OTUD4Q01804 1114 aaKnown RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 YWHAHQ04917 246 aaPredicted RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 FAAP100Q0VG06 881 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms