RNA–Protein interactions for RNA: ENST00000368198.7

SH2D2A-201, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,599 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-201ENST00000368198 PTPRDP23468 1912 aa18.84■□□□□ 0.61
SH2D2A-201ENST00000368198 CARNS1A5YM72 827 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 F9P00740 461 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 RB1P06400 928 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 NCAM1P13591 858 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 RPL22P35268 128 aaKnown RBP18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 NME3Q13232 169 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 XRCC4Q13426 336 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 NFE2Q16621 373 aaPredicted RBP18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 ZC3H18Q86VM9 953 aaKnown RBP18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 CEP57Q86XR8 500 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 FAM71DQ8N9W8 422 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 FBXO22Q8NEZ5 403 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 SPPL3Q8TCT6 385 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 SAMD11Q96NU1 681 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 C10orf88Q9H8K7 445 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 CWC15Q9P013 229 aaKnown RBP18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 CHD7Q9P2D1 2997 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 SF3B1O75533 1304 aaKnown RBP eCLIP18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 PATJQ8NI35 1801 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 PLXNA4Q9HCM2 1894 aa18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 COL4A4P53420 1690 aaPredicted RBP18.83■□□□□ 0.6
SH2D2A-201ENST00000368198 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 BCLAF3A2AJT9 711 aaKnown RBP18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 EPOPA6NHQ4 379 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 H3BRJ5 948 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 TTC4O95801 387 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 DNAJB1P25685 340 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 SCAPQ12770 1279 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 EFHC2Q5JST6 749 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 KCTD16Q68DU8 428 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 DDX53Q86TM3 631 aaKnown RBP18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 CDKL3Q8IVW4 592 aaPredicted RBP18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 PPIL6Q8IXY8 311 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 RNF168Q8IYW5 571 aaPredicted RBP18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 RTP4Q96DX8 246 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 FUBP3Q96I24 572 aaKnown RBP eCLIP18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 PHACTR1Q9C0D0 580 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 PIGVQ9NUD9 493 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 FARP1Q9Y4F1 1045 aaPredicted RBP18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 HEY1Q9Y5J3 304 aa18.82■□□□□ 0.6
SH2D2A-201ENST00000368198 SYNJ2BP-COX16A0A087WUM0 186 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 RFXAPO00287 272 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 GRM6O15303 877 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 SHBGP04278 402 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 GRIK1P39086 918 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 GPM6BQ13491 265 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 SLC39A12Q504Y0 691 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 VARS2Q5ST30 1063 aaKnown RBP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 EMC10Q5UCC4 262 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 VPS52Q8N1B4 723 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 SH2D3CQ8N5H7 860 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 PRCCQ92733 491 aaPredicted RBP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 LRCH3Q96II8 777 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 RBM15Q96T37 977 aaKnown RBP eCLIP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ROPN1BQ9BZX4 212 aaPredicted RBP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 CENPHQ9H3R5 247 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ROPN1Q9HAT0 212 aaPredicted RBP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 WDR6Q9NNW5 1121 aaKnown RBP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 COX16Q9P0S2 106 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 OR6C75A6NL08 312 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 CSPG5O95196 566 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 SOD2P04179 222 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 GOT1P17174 413 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 FGFR3P22607 806 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ADRA1BP35368 520 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ACTN2P35609 894 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ELAVL2Q12926 359 aaKnown RBP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ARL13BQ3SXY8 428 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 RTP2Q5QGT7 225 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 C6orf118Q5T5N4 469 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 BSPRYQ5W0U4 402 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ZNF280DQ6N043 979 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 BZW1Q7L1Q6 419 aaKnown RBP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 PYROXD2Q8N2H3 581 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 RNF139Q8WU17 664 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 POF1BQ8WVV4 589 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 MAGEB5Q9BZ81 275 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ZNF576Q9H609 170 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 USP29Q9HBJ7 922 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 NINJ2Q9NZG7 142 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 PAK5Q9P286 719 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 FBXW11Q9UKB1 542 aa18.81■□□□□ 0.6
SH2D2A-201ENST00000368198 VWA8A3KMH1 1905 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 H3BNC9 293 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 OR4Q2P0C623 313 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 AMPD1P23109 780 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 MAGEA4P43358 317 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 ZNF135P52742 658 aaPredicted RBP18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 SLC5A3P53794 718 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 ERVFC1P60507 584 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 SKOR1P84550 965 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 MRPL58Q14197 206 aaKnown RBP18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 USP41Q3LFD5 358 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 CTXN3Q4LDR2 81 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 NCBP2-AS2Q69YL0 99 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 VSTM1Q6UX27 236 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 C4orf22Q6V702 233 aa18.8■□□□□ 0.6
SH2D2A-201ENST00000368198 KDM7AQ6ZMT4 941 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms