RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 RPP40O75818 363 aaKnown RBP24.88■■□□□ 1.57
PFDN2-201ENST00000368010 ALDH1A2O94788 518 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 GFPT2O94808 682 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 SOX5P35711 763 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 LPAL2Q16609 132 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 DCAF6Q58WW2 860 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 EGFLAMQ63HQ2 1017 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 ANO7Q6IWH7 933 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 OLFML1Q6UWY5 402 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 ZDHHC17Q8IUH5 632 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 DHX40Q8IX18 779 aaKnown RBP24.88■■□□□ 1.57
PFDN2-201ENST00000368010 TMA16Q96EY4 203 aaKnown RBP24.88■■□□□ 1.57
PFDN2-201ENST00000368010 SLC39A13Q96H72 371 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 ERGIC2Q96RQ1 377 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 DDX50Q9BQ39 737 aaKnown RBP24.88■■□□□ 1.57
PFDN2-201ENST00000368010 IRX2Q9BZI1 471 aaPredicted RBP24.88■■□□□ 1.57
PFDN2-201ENST00000368010 POLMQ9NP87 494 aaPredicted RBP24.88■■□□□ 1.57
PFDN2-201ENST00000368010 GMEB2Q9UKD1 530 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 DMDP11532 3685 aa24.88■■□□□ 1.57
PFDN2-201ENST00000368010 VPS13AQ96RL7 3174 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 GFRA2O00451 464 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 IRAK2O43187 625 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 ADAM23O75077 832 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 LSM8O95777 96 aaKnown RBP24.87■■□□□ 1.57
PFDN2-201ENST00000368010 TRUB2O95900 331 aaKnown RBP24.87■■□□□ 1.57
PFDN2-201ENST00000368010 HOXD9P28356 352 aaPredicted RBP24.87■■□□□ 1.57
PFDN2-201ENST00000368010 STAT1P42224 750 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 JAM2P57087 298 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 CDK17Q00537 523 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 LAIR1Q6GTX8 287 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 TMEM92Q6UXU6 159 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 RASSF3Q86WH2 238 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 ZNF677Q86XU0 584 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 CHPFQ8IZ52 775 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 DEFB106AQ8N104 65 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 SLC2A13Q96QE2 648 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 FUCA2Q9BTY2 467 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 FAM204AQ9H8W3 233 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 HCN2Q9UL51 889 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 USP34Q70CQ2 3546 aa24.87■■□□□ 1.57
PFDN2-201ENST00000368010 RIF1Q5UIP0 2472 aaKnown RBP24.87■■□□□ 1.57
PFDN2-201ENST00000368010 SYCE3A1L190 88 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 IGLV3-25P01717 112 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 APOEP02649 317 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 MMEP08473 750 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 HNRNPLP14866 589 aaKnown RBP eCLIP24.86■■□□□ 1.57
PFDN2-201ENST00000368010 NTSR1P30989 418 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 SLC6A3Q01959 620 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 GEN1Q17RS7 908 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 FAM133BQ5BKY9 247 aaKnown RBP24.86■■□□□ 1.57
PFDN2-201ENST00000368010 SDE2Q6IQ49 451 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 SLC26A9Q7LBE3 791 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 ANKS1BQ7Z6G8 1248 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.86■■□□□ 1.57
PFDN2-201ENST00000368010 MSANTD4Q8NCY6 345 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 CLEC4EQ9ULY5 219 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 FAM186AA6NE01 2351 aa24.86■■□□□ 1.57
PFDN2-201ENST00000368010 GOLGA6L7A0A1B0GV03 622 aa24.85■■□□□ 1.57
PFDN2-201ENST00000368010 GRAP2O75791 330 aa24.85■■□□□ 1.57
PFDN2-201ENST00000368010 MOCS2O96007 188 aaPredicted RBP24.85■■□□□ 1.57
PFDN2-201ENST00000368010 HOXB2P14652 356 aa24.85■■□□□ 1.57
PFDN2-201ENST00000368010 RFWD3Q6PCD5 774 aa24.85■■□□□ 1.57
PFDN2-201ENST00000368010 ERICH1Q86X53 443 aa24.85■■□□□ 1.57
PFDN2-201ENST00000368010 DCLK2Q8N568 766 aa24.85■■□□□ 1.57
PFDN2-201ENST00000368010 MDGA1Q8NFP4 955 aa24.85■■□□□ 1.57
PFDN2-201ENST00000368010 C18orf8Q96DM3 657 aa24.85■■□□□ 1.57
PFDN2-201ENST00000368010 NOCTQ9UK39 431 aaKnown RBP24.85■■□□□ 1.57
PFDN2-201ENST00000368010 DAB1O75553 588 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 SLC6A4P31645 630 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 GBP1P32455 592 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 WASP42768 502 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 PITX1P78337 314 aaPredicted RBP24.84■■□□□ 1.57
PFDN2-201ENST00000368010 CDR2Q01850 454 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 EIF4HQ15056 248 aaKnown RBP24.84■■□□□ 1.57
PFDN2-201ENST00000368010 ZC3H12AQ5D1E8 599 aaKnown RBP24.84■■□□□ 1.57
PFDN2-201ENST00000368010 MPP7Q5T2T1 576 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 PIK3R6Q5UE93 754 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 NADSYN1Q6IA69 706 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 CACNA2D4Q7Z3S7 1137 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 ZNF397Q8NF99 534 aaPredicted RBP24.84■■□□□ 1.57
PFDN2-201ENST00000368010 SLC20A1Q8WUM9 679 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 UCMAQ8WVF2 138 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 ACOX2Q99424 681 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 TPSD1Q9BZJ3 242 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.84■■□□□ 1.57
PFDN2-201ENST00000368010 DDIT4Q9NX09 232 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 GPR179Q6PRD1 2367 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 OTOGLQ3ZCN5 2332 aa24.84■■□□□ 1.57
PFDN2-201ENST00000368010 TCRBV21S2A2A0A5A6 115 aa24.83■■□□□ 1.57
PFDN2-201ENST00000368010 TYW5A2RUC4 315 aaKnown RBP24.83■■□□□ 1.57
PFDN2-201ENST00000368010 GABRB2P47870 512 aa24.83■■□□□ 1.57
PFDN2-201ENST00000368010 SGSHP51688 502 aa24.83■■□□□ 1.57
PFDN2-201ENST00000368010 NOMO3P69849 1222 aa24.83■■□□□ 1.57
PFDN2-201ENST00000368010 E2F5Q15329 346 aa24.83■■□□□ 1.57
PFDN2-201ENST00000368010 FILIP1LQ4L180 1135 aa24.83■■□□□ 1.57
PFDN2-201ENST00000368010 USP39Q53GS9 565 aaKnown RBP24.83■■□□□ 1.57
PFDN2-201ENST00000368010 NAA35Q5VZE5 725 aa24.83■■□□□ 1.57
PFDN2-201ENST00000368010 ZNF557Q8N988 423 aaPredicted RBP24.83■■□□□ 1.57
PFDN2-201ENST00000368010 HJURPQ8NCD3 748 aaPredicted RBP24.83■■□□□ 1.57
PFDN2-201ENST00000368010 BCCIPQ9P287 314 aaKnown RBP eCLIP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms