RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 FAM186BQ8IYM0 893 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
MRPL55-209ENST00000366735 ACOX2Q99424 681 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 DUSP16Q9BY84 665 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 NMUR1Q9HB89 426 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 FSCN3Q9NQT6 498 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 OSER1Q9NX31 292 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 DACH1Q9UI36 760 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 STON1Q9Y6Q2 735 aa13□□□□□ -0.33
MRPL55-209ENST00000366735 MUC22E2RYF6 1773 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 MDM4O15151 490 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 STX10O60499 249 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 CER1O95813 267 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 TOP3BO95985 862 aaKnown RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 PENKP01210 267 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 NCAM1P13591 858 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 CORO1AP31146 461 aaKnown RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 GTF2H1P32780 548 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 PSMC2P35998 433 aaKnown RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 GCLMP48507 274 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 FUT11Q495W5 492 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 KRT39Q6A163 491 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 LUZP1Q86V48 1076 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 NAXDQ8IW45 347 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 CPXM2Q8N436 756 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 CADM4Q8NFZ8 388 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 PRCCQ92733 491 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 ELMO3Q96BJ8 720 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 PLD4Q96BZ4 506 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 TWNKQ96RR1 684 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 SLC2A11Q9BYW1 496 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 MMRN2Q9H8L6 949 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 TMEM8AQ9HCN3 771 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 CD248Q9HCU0 757 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 OLA1Q9NTK5 396 aaKnown RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 PLK2Q9NYY3 685 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 USP36Q9P275 1121 aaKnown RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 THAP10Q9P2Z0 257 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 FBXO10Q9UK96 956 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 KLK13Q9UKR3 277 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 HCN2Q9UL51 889 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 APOBEC2Q9Y235 224 aaKnown RBP12.99□□□□□ -0.33
MRPL55-209ENST00000366735 WDFY3Q8IZQ1 3526 aa12.99□□□□□ -0.33
MRPL55-209ENST00000366735 ASPMQ8IZT6 3477 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 ADAMTS20P59510 1910 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 SRRM3A6NNA2 597 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-209ENST00000366735 SMTNL1A8MU46 457 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 RHOBTB3O94955 611 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 CISD3P0C7P0 127 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 TRIM49P0CI25 452 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 TRIM49CP0CI26 452 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 ERCC5P28715 1186 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-209ENST00000366735 PGFP49763 221 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 MFAP3P55082 362 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 EFEMP1Q12805 493 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 GRIK2Q13002 908 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 TRIP6Q15654 476 aaKnown RBP12.98□□□□□ -0.33
MRPL55-209ENST00000366735 PPP1R26Q5T8A7 1209 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-209ENST00000366735 FYB2Q5VWT5 728 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 DHX40Q8IX18 779 aaKnown RBP12.98□□□□□ -0.33
MRPL55-209ENST00000366735 TAS1R2Q8TE23 839 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 SIPA1Q96FS4 1042 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 TOE1Q96GM8 510 aaKnown RBP12.98□□□□□ -0.33
MRPL55-209ENST00000366735 PDLIM2Q96JY6 352 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 HEXIM2Q96MH2 286 aaKnown RBP12.98□□□□□ -0.33
MRPL55-209ENST00000366735 PPP1R9BQ96SB3 815 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 PCED1AQ9H1Q7 454 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 MARCH2Q9P0N8 246 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 NUDT5Q9UKK9 219 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 USP3Q9Y6I4 520 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
MRPL55-209ENST00000366735 IGF2RP11717 2491 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 FAM221BA6H8Z2 402 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 BECN2A8MW95 431 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 TIMM44O43615 452 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 HMBSP08397 361 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 ZNF883P0CG24 379 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 CD59P13987 128 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 IL12RB1P42701 662 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 HARS2P49590 506 aaKnown RBP12.97□□□□□ -0.33
MRPL55-209ENST00000366735 MXI1P50539 228 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 YWHAGP61981 247 aaKnown RBP eCLIP12.97□□□□□ -0.33
MRPL55-209ENST00000366735 YWHAEP62258 255 aaKnown RBP12.97□□□□□ -0.33
MRPL55-209ENST00000366735 CCDC173Q0VFZ6 552 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 TMEM259Q4ZIN3 620 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 ZNF394Q53GI3 561 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 ZNF658Q5TYW1 1059 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-209ENST00000366735 SERPINA13PQ6UXR4 307 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 RAB44Q7Z6P3 723 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-209ENST00000366735 TMPRSS6Q8IU80 811 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 GUF1Q8N442 669 aaKnown RBP12.97□□□□□ -0.33
MRPL55-209ENST00000366735 ZCCHC9Q8N567 271 aaKnown RBP12.97□□□□□ -0.33
MRPL55-209ENST00000366735 ZNF557Q8N988 423 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-209ENST00000366735 FBXL13Q8NEE6 735 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 DDI1Q8WTU0 396 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 DNASE2BQ8WZ79 361 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 ERLEC1Q96DZ1 483 aa12.97□□□□□ -0.33
MRPL55-209ENST00000366735 NUP58Q9BVL2 599 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms