RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IL12RB1P42701 662 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DHPSP49366 369 aaPredicted RBP14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SGSHP51688 502 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 EIF4HQ15056 248 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 FAM133BQ5BKY9 247 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PPM1JQ5JR12 505 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DPY19L2P1Q6NXN4 242 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DENND1BQ6P3S1 775 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 GJB7Q6PEY0 223 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CLEC17AQ6ZS10 378 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CYP2U1Q7Z449 544 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ANKS1BQ7Z6G8 1248 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 TMEM110Q86TL2 294 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SCUBE3Q8IX30 993 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PGBD3Q8N328 593 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DDI1Q8WTU0 396 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CRACR2AQ9BSW2 395 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 LSM14BQ9BX40 385 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CLSTN2Q9H4D0 955 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ACP6Q9NPH0 428 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ELOVL2Q9NXB9 296 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PILRBQ9UKJ0 227 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MAP3K13O43283 966 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 TIMM44O43615 452 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ZNF217O75362 1048 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 HLA-FP30511 346 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 IRX4P78413 519 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 APBA1Q02410 837 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 NNTQ13423 1086 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 EIF4EBP2Q13542 120 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ZNF234Q14588 700 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 FUT11Q495W5 492 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MPP7Q5T2T1 576 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PIK3R6Q5UE93 754 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SLC36A4Q6YBV0 504 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SYT12Q8IV01 421 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 UNC45BQ8IWX7 931 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 WDTC1Q8N5D0 677 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SHC3Q92529 594 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 TMA16Q96EY4 203 aaKnown RBP14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SLC39A13Q96H72 371 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 LMLNQ96KR4 655 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 FAM81BQ96LP2 452 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 EDEM2Q9BV94 578 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MKRN2Q9H000 416 aaKnown RBP14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SLC6A17Q9H1V8 727 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SIX2Q9NPC8 291 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CD93Q9NPY3 652 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 APEX2Q9UBZ4 518 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MUC22E2RYF6 1773 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CEP192Q8TEP8 1941 aa14.24□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CNOT1A5YKK6 2376 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 KHNYNO15037 678 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PAPSS1O43252 624 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 AP5Z1O43299 807 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 TSPAN3O60637 253 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 LETM1O95202 739 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 NCAM1P13591 858 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 KRT5P13647 590 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ITPKAP23677 461 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PON1P27169 355 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SLC6A4P31645 630 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 HOXD12P35452 270 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ACADSBP45954 432 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 COPAP53621 1224 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CKAP5Q14008 2032 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 NUGGCQ68CJ6 796 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 IL31Q6EBC2 164 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 NADSYN1Q6IA69 706 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SLC23A3Q6PIS1 610 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 GBP6Q6ZN66 633 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ADIPOR2Q86V24 386 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SLC41A1Q8IVJ1 513 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DQX1Q8TE96 717 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SORCS1Q8WY21 1168 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PIGKQ92643 395 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ZNF419Q96HQ0 510 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 FCRL2Q96LA5 508 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MIS12Q9H081 205 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ITM2CQ9NQX7 267 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 USP36Q9P275 1121 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 NAALADL1Q9UQQ1 740 aa14.23□□□□□ -0.13
TNFRSF1A-202ENST00000366159 GOLGA6L7A0A1B0GV03 622 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 C4orf47A7E2U8 309 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 IRAK2O43187 625 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MED7O43513 233 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ACSL4O60488 711 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 IGLV3-25P01717 112 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 GNA15P30679 374 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DPP6P42658 865 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 TBX4P57082 545 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 E2F5Q15329 346 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 EXOC3L4Q17RC7 722 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DPCR1Q3MIW9 517 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MIIPQ5JXC2 388 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 LYSMD4Q5XG99 296 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 RFWD3Q6PCD5 774 aa14.22□□□□□ -0.13
TNFRSF1A-202ENST00000366159 WFDC5Q8TCV5 224 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms