RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TXNL4AP83876 142 aaKnown RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 DGCR2P98153 550 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 PSG6Q00889 435 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 TAP1Q03518 808 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 PDCLQ13371 301 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 FOXE3Q13461 319 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 CBFBQ13951 182 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 MIIPQ5JXC2 388 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 WDR45BQ5MNZ6 344 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 FNDC7Q5VTL7 733 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 KAZNQ674X7 775 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 DENND2CQ68D51 928 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 FAAH2Q6GMR7 532 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 FAM180BQ6P0A1 224 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 SFTPA1Q8IWL2 248 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 FAM71DQ8N9W8 422 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 ABHD11Q8NFV4 315 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 LINC00476Q8WZB0 136 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 TFAP2BQ92481 460 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 HDAC2Q92769 488 aaKnown RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 RRP36Q96EU6 259 aaKnown RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 EDC3Q96F86 508 aaKnown RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 TRMT61AQ96FX7 289 aaKnown RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 LENG8Q96PV6 779 aaPredicted RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 SNX18Q96RF0 628 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 CINPQ9BW66 212 aaPredicted RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 FSD1LQ9BXM9 530 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 CDCP1Q9H5V8 836 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 PLEKHA2Q9HB19 425 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 PREBQ9HCU5 417 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 SLC2A4RGQ9NR83 387 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 SNX15Q9NRS6 342 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 SWAP70Q9UH65 585 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 CCNL1Q9UK58 526 aaPredicted RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 RAB21Q9UL25 225 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 TRPC5Q9UL62 973 aaPredicted RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBX20Q9UMR3 447 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 SLC12A4Q9UP95 1085 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 RCE1Q9Y256 329 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 PCDHA10Q9Y5I2 948 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3DA0A087WVF3 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3IA0A087WXS9 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3EA0A087X179 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3KA0A087X1G2 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 CCDC151A5D8V7 595 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3BA6NDS4 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3FA6NER0 549 aaPredicted RBP4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3LB9A6J9 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 C1QTNF3-AMACRE9PGA6 284 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 EIF5BO60841 1220 aaKnown RBP4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 URI1O94763 535 aaPredicted RBP4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3HP0C7X1 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 HKR1P10072 659 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 CHN1P15882 459 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 IGFBP2P18065 325 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 CAPN3P20807 821 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 DUSP1P28562 367 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 CYP2C18P33260 490 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 GRK5P34947 590 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 PNPLA4P41247 253 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 RCAN1P53805 252 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 GPC5P78333 572 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 CCDC15Q0P6D6 951 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 PTPAQ15257 358 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 BAK1Q16611 211 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 CBWD5Q5RIA9 395 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 NAA35Q5VZE5 725 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3GQ6DHY5 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3CQ6IPX1 549 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 WDR93Q6P2C0 686 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D1Q86TI0 1168 aaPredicted RBP4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D3Q8IZP1 549 aaPredicted RBP4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 LINC01465Q8N7H1 131 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 C12orf76Q8N812 135 aaPredicted RBP4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 RFFLQ8WZ73 363 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 ST8SIA4Q92187 359 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 KAZALD1Q96I82 304 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 PPP1R10Q96QC0 940 aaKnown RBP4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 ARHGAP39Q9C0H5 1083 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 RMI1Q9H9A7 625 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 GAR1Q9NY12 217 aaKnown RBP4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 SEMA5BQ9P283 1151 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 PCDHB2Q9Y5E7 798 aa4.19□□□□□ -1.74
RNU6-28P-201ENST00000362378 AGAP5A6NIR3 686 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 C3orf70A6NLC5 250 aaPredicted RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 F5H0A9 414 aaPredicted RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 H0YIZ8 118 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 KLK10O43240 276 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 SUV39H1O43463 412 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 PRAMEF2O60811 474 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 BAIAP3O94812 1187 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 ESRRBO95718 433 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 TTLL1O95922 423 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 CSF1P09603 554 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 HNRNPA1P09651 372 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 IFIT1P09914 478 aaKnown RBP4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 NPSP0C0P6 89 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 ACP5P13686 325 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 TNNT1P13805 278 aa4.18□□□□□ -1.74
RNU6-28P-201ENST00000362378 ENGP17813 658 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms