RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 DENND4AQ7Z401 1863 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 CCDC185Q8N715 623 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 EXD1Q8NHP7 514 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 HSPH1Q92598 858 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 RNF34Q969K3 372 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 NTAN1Q96AB6 310 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 ZNF707Q96C28 371 aaPredicted RBP21.43■■□□□ 1.02
SHISA4-201ENST00000362011 RBM41Q96IZ5 413 aaKnown RBP21.43■■□□□ 1.02
SHISA4-201ENST00000362011 ATXN3LQ9H3M9 355 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 WDCPQ9H6R7 721 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 PIDD1Q9HB75 910 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 KLHL11Q9NVR0 708 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 CDC23Q9UJX2 597 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 TLR6Q9Y2C9 796 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 COCHO43405 550 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 ZRANB2O95218 330 aaKnown RBP eCLIP21.42■■□□□ 1.02
SHISA4-201ENST00000362011 PAPLNO95428 1278 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 TBX18O95935 607 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 RHOP08100 348 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 KPNA1P52294 538 aaPredicted RBP21.42■■□□□ 1.02
SHISA4-201ENST00000362011 TBX4P57082 545 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 CYP4F8P98187 520 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 ARL13BQ3SXY8 428 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 KCNT1Q5JUK3 1230 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 TMEM184AQ6ZMB5 413 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 TRIM67Q6ZTA4 783 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 PSTKQ8IV42 348 aaKnown RBP21.42■■□□□ 1.02
SHISA4-201ENST00000362011 RCOR2Q8IZ40 523 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 SMG7Q92540 1137 aaKnown RBP21.42■■□□□ 1.02
SHISA4-201ENST00000362011 ACSF2Q96CM8 615 aaPredicted RBP21.42■■□□□ 1.02
SHISA4-201ENST00000362011 TRPC7Q9HCX4 862 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 FZD10Q9ULW2 581 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 AP4E1Q9UPM8 1137 aa21.42■■□□□ 1.02
SHISA4-201ENST00000362011 HBS1LQ9Y450 684 aaKnown RBP21.42■■□□□ 1.02
SHISA4-201ENST00000362011 A0A1W2PRU2 124 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 SLC12A8A0AV02 714 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 C2orf78A6NCI8 922 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 ZNF185O15231 689 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 CEP104O60308 925 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 PFKLP17858 780 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 CCR1P32246 355 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 CETN2P41208 172 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 ZNF211Q13398 564 aaPredicted RBP21.41■■□□□ 1.02
SHISA4-201ENST00000362011 PPP2R5DQ14738 602 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 GRASPQ7Z6J2 395 aaPredicted RBP21.41■■□□□ 1.02
SHISA4-201ENST00000362011 MIB1Q86YT6 1006 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 CCDC50Q8IVM0 306 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 C12orf76Q8N812 135 aaPredicted RBP21.41■■□□□ 1.02
SHISA4-201ENST00000362011 COG1Q8WTW3 980 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 SUSD6Q92537 303 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.41■■□□□ 1.02
SHISA4-201ENST00000362011 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.41■■□□□ 1.02
SHISA4-201ENST00000362011 GPATCH2LQ9NWQ4 482 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 MRFAP1Q9Y605 127 aa21.41■■□□□ 1.02
SHISA4-201ENST00000362011 LRRD1A4D1F6 860 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 TMEM221A6NGB7 291 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 M0R296 226 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 ZNF197O14709 1029 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 SLC2A3P11169 496 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 PYGMP11217 842 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 DDX6P26196 483 aaKnown RBP eCLIP21.4■■□□□ 1.02
SHISA4-201ENST00000362011 ADRA1BP35368 520 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 ZXDAP98168 799 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 SCAPQ12770 1279 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 ARHGAP15Q53QZ3 475 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 ZC3H12AQ5D1E8 599 aaKnown RBP21.4■■□□□ 1.02
SHISA4-201ENST00000362011 EFHC2Q5JST6 749 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 RARS2Q5T160 578 aaKnown RBP21.4■■□□□ 1.02
SHISA4-201ENST00000362011 TMC5Q6UXY8 1006 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 KCTD6Q8NC69 237 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 PRSS33Q8NF86 280 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 RNF25Q96BH1 459 aaPredicted RBP21.4■■□□□ 1.02
SHISA4-201ENST00000362011 SLC39A13Q96H72 371 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 CAPZA3Q96KX2 299 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 TKTL2Q9H0I9 626 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 DHX35Q9H5Z1 703 aaKnown RBP21.4■■□□□ 1.02
SHISA4-201ENST00000362011 ARHGEF38Q9NXL2 777 aa21.4■■□□□ 1.02
SHISA4-201ENST00000362011 USP15Q9Y4E8 981 aaPredicted RBP21.4■■□□□ 1.02
SHISA4-201ENST00000362011 OLFM2O95897 454 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 APOEP02649 317 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 MBL2P11226 248 aaPredicted RBP21.39■■□□□ 1.01
SHISA4-201ENST00000362011 GJA1P17302 382 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 KDELR1P24390 212 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 CCR2P41597 374 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 CDH6P55285 790 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 COPS2P61201 443 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 RING1Q06587 406 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 KRT81Q14533 505 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 PDK2Q15119 407 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 WHAMMP3Q1A5X7 153 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 PRSS36Q5K4E3 855 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 CCDC181Q5TID7 509 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 TXNDC8Q6A555 127 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 ANKRD54Q6NXT1 300 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 RASGEF1CQ8N431 466 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 ATP6V0D2Q8N8Y2 350 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 SHKBP1Q8TBC3 707 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 RAPGEF5Q92565 580 aa21.39■■□□□ 1.01
SHISA4-201ENST00000362011 FCRL2Q96LA5 508 aaPredicted RBP21.39■■□□□ 1.01
SHISA4-201ENST00000362011 PHF7Q9BWX1 381 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms