RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CLSTN3Q9BQT9 956 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 DHX33Q9H6R0 707 aaKnown RBP11.92□□□□□ -0.5
CNOT4-203ENST00000361528 CYP4F11Q9HBI6 524 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 SYTL2Q9HCH5 934 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 SNTG2Q9NY99 539 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 IPO11Q9UI26 975 aaKnown RBP11.92□□□□□ -0.5
CNOT4-203ENST00000361528 PSME2Q9UL46 239 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 SHOC2Q9UQ13 582 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 NOSIPQ9Y314 301 aaKnown RBP11.92□□□□□ -0.5
CNOT4-203ENST00000361528 DUOX1Q9NRD9 1551 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 ADAMTSL3P82987 1691 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 SPATA31A1Q5TZJ5 1347 aa11.92□□□□□ -0.5
CNOT4-203ENST00000361528 TSPY2A6NKD2 308 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 SHOXO15266 292 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 ZW10O43264 779 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 CCNT1O60563 726 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 KCNJ13O60928 360 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 ZC3H11AO75152 810 aaKnown RBP eCLIP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 TSPY3P0CV98 308 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 TSPY8P0CW00 308 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 CDH15P55291 814 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 EIF3EP60228 445 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 MRPS22P82650 360 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 TSPY1Q01534 308 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 OTUD4Q01804 1114 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 PMS2P3Q13401 168 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 KRT79Q5XKE5 535 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 SLFN13Q68D06 897 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 ARCQ7LC44 396 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 GALNT7Q86SF2 657 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 ARMC8Q8IUR7 673 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 LACC1Q8IV20 430 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 ZC3H7AQ8IWR0 971 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 RASGRP4Q8TDF6 673 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 FNIP1Q8TF40 1166 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 ATG4AQ8WYN0 398 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 MRPL9Q9BYD2 267 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 YTHDF1Q9BYJ9 559 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 NYXQ9GZU5 481 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 RAD21L1Q9H4I0 556 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 AKIP1Q9NQ31 210 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 SEPT11Q9NVA2 429 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 PCSK1NQ9UHG2 260 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 VANGL2Q9ULK5 521 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 GOLGA8IPA6NC78 632 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 MAN1A2O60476 641 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 GZMAP12544 262 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 CDH1P12830 882 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 CFL1P23528 166 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 LEPRP48357 1165 aaKnown RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 COG2Q14746 738 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 DLG2Q15700 870 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 AASDHQ4L235 1098 aaPredicted RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 PERM1Q5SV97 790 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 TTC33Q6PID6 262 aaPredicted RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 DENND5BQ6ZUT9 1274 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 SH2D5Q6ZV89 423 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 NEK8Q86SG6 692 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 GPBP1Q86WP2 473 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 HERC6Q8IVU3 1022 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 ZNF564Q8TBZ8 553 aaPredicted RBP11.91□□□□□ -0.5
CNOT4-203ENST00000361528 SLC35C1Q96A29 364 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 VMP1Q96GC9 406 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 SLA2Q9H6Q3 261 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 CFL2Q9Y281 166 aa11.91□□□□□ -0.5
CNOT4-203ENST00000361528 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 ISPDA4D126 451 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 SFI1A8K8P3 1242 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 TNPO2O14787 897 aaKnown RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 MYCP01106 439 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 KRT8P05787 483 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 FGRP09769 529 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 EPHA3P29320 983 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 STAT3P40763 770 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 OPRL1P41146 370 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 AP2S1P53680 142 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 COPZ1P61923 177 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 RALGDSQ12967 914 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 POU6F1Q14863 301 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 SNX17Q15036 470 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 DCAF17Q5H9S7 520 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 ZC3H15Q8WU90 426 aaKnown RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 PDCD6IPQ8WUM4 868 aaKnown RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 VPS33AQ96AX1 596 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 EMILIN2Q9BXX0 1053 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 GPR88Q9GZN0 384 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 MKRN2Q9H000 416 aaKnown RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 ATP13A2Q9NQ11 1180 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 ABI2Q9NYB9 513 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 NXF1Q9UBU9 619 aaKnown RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 ENPP5Q9UJA9 477 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 ST14Q9Y5Y6 855 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 GAKO14976 1311 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 ATRNL1Q5VV63 1379 aa11.9□□□□□ -0.5
CNOT4-203ENST00000361528 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.5
CNOT4-203ENST00000361528 FAM25AB3EWG3 89 aa11.9□□□□□ -0.51
CNOT4-203ENST00000361528 FAM25CB3EWG5 89 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms