RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SEPT5Q99719 369 aaPredicted RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 MTIF3Q9H2K0 278 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ADGRL2O95490 1459 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 IFRD1O00458 451 aaPredicted RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 LYNP07948 512 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 BOLA3Q53S33 107 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 METTL16Q86W50 562 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 SLC9A6Q92581 669 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 TMBIM4Q9HC24 238 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ADCY6O43306 1168 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CDC42P60953 191 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 Q4G0T1 1027 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 FAM81AQ8TBF8 368 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 TRIT1Q9H3H1 467 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ACOT9Q9Y305 439 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 MROH7-TTC4A0A0A0MT08 1334 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 SCGNO76038 276 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 GLP2RO95838 553 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 IRF1P10914 325 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 HOXB6P17509 224 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 PAX7P23759 505 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 PIK3CGP48736 1102 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 GEMP55040 296 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 KCTD21Q4G0X4 260 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 SGMS1Q86VZ5 419 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 SLC26A11Q86WA9 606 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 GRIP2Q9C0E4 1043 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 RPS6KA6Q9UK32 745 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ATF6P18850 670 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CHN2P52757 468 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 GOLGA7BQ2TAP0 167 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 IRAK1BP1Q5VVH5 260 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 PMPCBO75439 489 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 FRG1Q14331 258 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 DENND5BQ6ZUT9 1274 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 KLHL32Q96NJ5 620 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 WDCPQ9H6R7 721 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 SMCO3A2RU48 225 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ALG11Q2TAA5 492 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CDK5RAP1Q96SZ6 601 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 A1CFQ9NQ94 594 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 GON4LQ3T8J9 2241 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CES2O00748 559 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 PDHBP11177 359 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ME2P23368 584 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ZMYND11Q15326 602 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 PYDC2Q56P42 97 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 IRGCQ6NXR0 463 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 STRBPQ96SI9 672 aaKnown RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 REEP2Q9BRK0 252 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 VANGL2Q9ULK5 521 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CBX5P45973 191 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■■□□ 16
VPS13A-203ENST00000360280 PCDHGA3Q9Y5H0 932 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CHRNGP07510 517 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 RFC5P40937 340 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 GSSP48637 474 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 VPS72Q15906 364 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 TRPV1Q8NER1 839 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 DPY30Q9C005 99 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.51□□□□□ -0.896e-8■■■■□ 23.2
VPS13A-203ENST00000360280 DNAJC16Q9Y2G8 782 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 FLT1P17948 1338 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 RTN3O95197 1032 aaPredicted RBP9.51□□□□□ -0.89
VPS13A-203ENST00000360280 MYL9P24844 172 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 RGS7P49802 495 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 C10orf120Q5SQS8 335 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 SHC4Q6S5L8 630 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ACTR8Q9H981 624 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 RNF146Q9NTX7 359 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 CDH9Q9ULB4 789 aa9.51□□□□□ -0.89
VPS13A-203ENST00000360280 ATP13A5Q4VNC0 1218 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 XKR3Q5GH77 459 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 IER5Q5VY09 327 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 FNDC5Q8NAU1 212 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 NOA1Q8NC60 698 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 FRMD6Q96NE9 622 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 HBS1LQ9Y450 684 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MYH1P12882 1939 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 MYH4Q9Y623 1939 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 A0A088AWK7 358 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 HLA-DQA2P01906 255 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ODC1P11926 461 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ZNF10P21506 573 aaPredicted RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 NME5P56597 212 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 IL2P60568 153 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 DGCR6Q14129 220 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 FASTKQ14296 549 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 TNFAIP8L3Q5GJ75 292 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ERICH5Q6P6B1 374 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GATAD2AQ86YP4 633 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 DEPDC4Q8N2C3 294 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 TSPAN14Q8NG11 270 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 CDC42EP4Q9H3Q1 356 aaKnown RBP9.5□□□□□ -0.89
VPS13A-203ENST00000360280 ASAP1Q9ULH1 1129 aa9.5□□□□□ -0.89
VPS13A-203ENST00000360280 GAS2O43903 313 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms