RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SNX24Q9Y343 169 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 INSL5Q9Y5Q6 135 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 IRAK3Q9Y616 596 aa24.01■■□□□ 1.43
SDF4-202ENST00000360001 TGM5O43548 720 aa24■■□□□ 1.43
SDF4-202ENST00000360001 CREB3O43889 395 aa24■■□□□ 1.43
SDF4-202ENST00000360001 EIF3EP60228 445 aaKnown RBP24■■□□□ 1.43
SDF4-202ENST00000360001 ALLCQ8N6M5 410 aa24■■□□□ 1.43
SDF4-202ENST00000360001 OVCA2Q8WZ82 227 aa24■■□□□ 1.43
SDF4-202ENST00000360001 SLC39A13Q96H72 371 aa24■■□□□ 1.43
SDF4-202ENST00000360001 KLHL5Q96PQ7 755 aa24■■□□□ 1.43
SDF4-202ENST00000360001 TLR6Q9Y2C9 796 aa24■■□□□ 1.43
SDF4-202ENST00000360001 SNX10Q9Y5X0 201 aa24■■□□□ 1.43
SDF4-202ENST00000360001 C5orf67F2Z3F1 127 aa24■■□□□ 1.43
SDF4-202ENST00000360001 SPATA31D3P0C874 917 aa24■■□□□ 1.43
SDF4-202ENST00000360001 ZFXP17010 805 aaPredicted RBP24■■□□□ 1.43
SDF4-202ENST00000360001 RPL21P46778 160 aaKnown RBP24■■□□□ 1.43
SDF4-202ENST00000360001 EFEMP1Q12805 493 aa24■■□□□ 1.43
SDF4-202ENST00000360001 DPYSQ14117 519 aa24■■□□□ 1.43
SDF4-202ENST00000360001 NCBP2-AS2Q69YL0 99 aa24■■□□□ 1.43
SDF4-202ENST00000360001 LILRA6Q6PI73 481 aa24■■□□□ 1.43
SDF4-202ENST00000360001 SPATA31D4Q6ZUB0 917 aa24■■□□□ 1.43
SDF4-202ENST00000360001 PDZD8Q8NEN9 1154 aa24■■□□□ 1.43
SDF4-202ENST00000360001 TMEM121Q9BTD3 319 aa24■■□□□ 1.43
SDF4-202ENST00000360001 OSBPL2Q9H1P3 480 aa24■■□□□ 1.43
SDF4-202ENST00000360001 NEUROG2Q9H2A3 272 aa24■■□□□ 1.43
SDF4-202ENST00000360001 CCSER2Q9H7U1 834 aa24■■□□□ 1.43
SDF4-202ENST00000360001 TMEM51Q9NW97 253 aa24■■□□□ 1.43
SDF4-202ENST00000360001 KCNU1A8MYU2 1149 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 EEF2KO00418 725 aaKnown RBP23.99■■□□□ 1.43
SDF4-202ENST00000360001 MCF2LO15068 1137 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 VEPH1Q14D04 833 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 SHHQ15465 462 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 TRIP13Q15645 432 aaPredicted RBP23.99■■□□□ 1.43
SDF4-202ENST00000360001 C10orf120Q5SQS8 335 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 SNX30Q5VWJ9 437 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 RFX8Q6ZV50 586 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 GSTA5Q7RTV2 222 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 POF1BQ8WVV4 589 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 TRMT2BQ96GJ1 504 aaKnown RBP23.99■■□□□ 1.43
SDF4-202ENST00000360001 FCRL2Q96LA5 508 aaPredicted RBP23.99■■□□□ 1.43
SDF4-202ENST00000360001 HAPLN3Q96S86 360 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 C10orf88Q9H8K7 445 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 PRDM16Q9HAZ2 1276 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 ENTPD7Q9NQZ7 604 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 GRHL1Q9NZI5 618 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 OR12D3Q9UGF7 316 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 MFHAS1Q9Y4C4 1052 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 HEY1Q9Y5J3 304 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 CHD7Q9P2D1 2997 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 GBF1Q92538 1859 aa23.99■■□□□ 1.43
SDF4-202ENST00000360001 CHD9Q3L8U1 2897 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 TLR5O60602 858 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 ADH1AP07327 375 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 RBP3P10745 1247 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 KLRC2P26717 231 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 HCAR3P49019 387 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 GBE1Q04446 702 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 NNTQ13423 1086 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 HLTFQ14527 1009 aaKnown RBP eCLIP23.98■■□□□ 1.43
SDF4-202ENST00000360001 GLIS1Q8NBF1 620 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 ZNF512Q96ME7 567 aaPredicted RBP23.98■■□□□ 1.43
SDF4-202ENST00000360001 CEP290O15078 2479 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 HIDE1A8MVS5 230 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 SLC10A2Q12908 348 aaPredicted RBP23.98■■□□□ 1.43
SDF4-202ENST00000360001 COL13A1Q5TAT6 717 aaPredicted RBP23.98■■□□□ 1.43
SDF4-202ENST00000360001 PRUNE1Q86TP1 453 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 ZNF276Q8N554 614 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 MRPL43Q8N983 215 aaKnown RBP23.98■■□□□ 1.43
SDF4-202ENST00000360001 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.98■■□□□ 1.43
SDF4-202ENST00000360001 TLR9Q9NR96 1032 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 MARCH2Q9P0N8 246 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 ASIC3Q9UHC3 531 aa23.98■■□□□ 1.43
SDF4-202ENST00000360001 ZNF840PA6NDX5 716 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 C2orf71A6NGG8 1288 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 PAGE1O75459 146 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 KRT14P02533 472 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 FAM153BP0C7A2 387 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 IVDP26440 423 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 GGCXP38435 758 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 ZNF135P52742 658 aaPredicted RBP23.97■■□□□ 1.43
SDF4-202ENST00000360001 EPHB3P54753 998 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 TBX4P57082 545 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 TPI1P60174 286 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 UBE3AQ05086 875 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 FAM153CQ494X1 144 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 PLPP4Q5VZY2 271 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 EMBQ6PCB8 327 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 DNAJB7Q7Z6W7 309 aaPredicted RBP23.97■■□□□ 1.43
SDF4-202ENST00000360001 ZC3H18Q86VM9 953 aaKnown RBP23.97■■□□□ 1.43
SDF4-202ENST00000360001 PSMG2Q969U7 264 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 EMILIN2Q9BXX0 1053 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 FAM153AQ9UHL3 310 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 NR2E3Q9Y5X4 410 aa23.97■■□□□ 1.43
SDF4-202ENST00000360001 CCDC85CA6NKD9 419 aa23.96■■□□□ 1.43
SDF4-202ENST00000360001 DCLK1O15075 740 aa23.96■■□□□ 1.43
SDF4-202ENST00000360001 LRIG2O94898 1065 aa23.96■■□□□ 1.43
SDF4-202ENST00000360001 CSPG5O95196 566 aa23.96■■□□□ 1.43
SDF4-202ENST00000360001 CA3P07451 260 aa23.96■■□□□ 1.43
SDF4-202ENST00000360001 NR2C2P49116 596 aa23.96■■□□□ 1.43
SDF4-202ENST00000360001 PLD1Q13393 1074 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms