RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PLCB3Q01970 1234 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 TAF5Q15542 800 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 MDH1BQ5I0G3 518 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 FAM172AQ8WUF8 416 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 KCTD13Q8WZ19 329 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 CENPIQ92674 756 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 TMEM169Q96HH4 297 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 GDF15Q99988 308 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 C11orf84Q9BUA3 381 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 MLXIPLQ9NP71 852 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 MYBPHLA2RUH7 354 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 CCT8L1PA6NM43 557 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 C2CD2LO14523 706 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 MDM4O15151 490 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 CD48P09326 243 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 TYMPP19971 482 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 P3H1Q32P28 736 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 DDX23Q9BUQ8 820 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 CALN1Q9BXU9 219 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 B3GNT5Q9BYG0 378 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 ROPN1BQ9BZX4 212 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 ROPN1Q9HAT0 212 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 INTS9Q9NV88 658 aaKnown RBP14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 BAIAP2L1Q9UHR4 511 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 DSEQ9UL01 958 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 CLDN5O00501 218 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 LCP1P13796 627 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 MMP13P45452 471 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 VPS41P49754 854 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 ATP11AP98196 1134 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 DPYSL3Q14195 570 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 CDO1Q16878 200 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 ACCSLQ4AC99 568 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 C6orf118Q5T5N4 469 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 THEMIS2Q5TEJ8 643 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 PRSS55Q6UWB4 352 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 PCGF5Q86SE9 256 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 HAUS1Q96CS2 278 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 PGM2Q96G03 612 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 CDC42EP4Q9H3Q1 356 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 NGRNQ9NPE2 291 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 DNAJC17Q9NVM6 304 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 SPG21Q9NZD8 308 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 NPR3P17342 541 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 FGFR3P22607 806 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 CHKAP35790 457 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 DYNLT1P63172 113 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 LACTB2Q53H82 288 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 LRRTM3Q86VH5 581 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 ZCCHC9Q8N567 271 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 RNF157Q96PX1 679 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 TMLHEQ9NVH6 421 aa14.35□□□□□ -0.11
CSNK1E-201ENST00000359867 SGK1O00141 431 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 HGSO14964 777 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 SYN3O14994 580 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 CA3P07451 260 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 PECAM1P16284 738 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 CDC25CP30307 473 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 GBP2P32456 591 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 PBX2P40425 430 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 ELF3P78545 371 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 KRT81Q14533 505 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 MORF4L2Q15014 288 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 SCYL2Q6P3W7 929 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 TBC1D1Q86TI0 1168 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 PIGZQ86VD9 579 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 AUTS2Q8WXX7 1259 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 CLP1Q92989 425 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 C17orf80Q9BSJ5 609 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 TMEM121Q9BTD3 319 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 TTPALQ9BTX7 342 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 RHOBTB2Q9BYZ6 727 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 ABCF3Q9NUQ8 709 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.34□□□□□ -0.111e-8■■□□□ 12.8
CSNK1E-201ENST00000359867 CDH9Q9ULB4 789 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 PCDHB12Q9Y5F1 795 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 FGF18O76093 207 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 TTC4O95801 387 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 EFEMP2O95967 443 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 CREB1P16220 341 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 RPL17P18621 184 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 DNAJB2P25686 324 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 PCSK1P29120 753 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 ARPP19P56211 112 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 HDAC4P56524 1084 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 ELAVL2Q12926 359 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 GPS1Q13098 491 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 XRCC4Q13426 336 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 RBBP5Q15291 538 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 LONRF1Q17RB8 773 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 RSPO2Q6UXX9 243 aaPredicted RBP14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 PAQR9Q6ZVX9 377 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 STRADAQ7RTN6 431 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 THEM5Q8N1Q8 247 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 KLHL23Q8NBE8 558 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms